Query= MSMg01no475_f14.b1 MSMg01no475_f14.b1 CHROMAT_FILE:
MSMg01no475_f14.b1 PHD_FILE: MSMg01no475_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:05 2005
(455 letters)
>mm_chr2_91294586_91295440
Length = 855
Score = 835 bits (432), Expect = 0.0
Identities = 449/460 (97%), Gaps = 10/460 (2%)
Strand = Plus / Minus
Query: 1 caacaatttaatttctaagtacaattcttctaaaagtgataaaagcttgaagcttcacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 caacaatttaatttctaagtacaattcttctaaaagtgataaaagcttgaagcttcacat 517
Query: 61 cttaagacattaaatcaggagtgactttgcaagcatggggcagcagctgtaggcattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cttaagacattaaatcaggagtgactttgcaagcatggggcagcagctgtaggcattttt 457
Query: 121 gaaagtgggtaccattagcatctcgtgggttaagtgaagccaggtttgctggtgaacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gaaagtgggtaccattagcatctcgtgggttaagtgaagccaggtttgctggtgaacatc 397
Query: 181 ctataatgaacaggatattccccaataagaagacttgccagcctaactagtaagtggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctataatgaacaggatattccccaataagaagacttgccagcctaactagtaagtggtgc 337
Query: 241 tgagcttg-----tttttctcctttacaagaccgagaattcaaatgtgcaaatgagcctc 295
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgagcttgggaaa-----ctcctttacaagaccgagaattcaaatgtgcaaatgagcctc 282
Query: 296 ttcatctttgtgagctcactatcttattgaaagcaatacaagtggagggggaagtcctgg 355
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 281 ttcatctttgtgagctcactatcttattgaaagcaatacaagtagagggggaagtcctgg 222
Query: 356 attttttcccccaggtgctatgggtgtgatggtttatgcgtgttatcgcagcactaggga 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 attttttcccccaggtgctatgggtgtgatggtttatgcgtgttatcgcagcactaggga 162
Query: 416 ggctgatgtaagaggacttgcaaattgatggctgatctgt 455
||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ggctgatgtaagaggacttgcaaattgatggctgatctgt 122
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_f14.g1 MSMg01no475_f14.g1 CHROMAT_FILE:
MSMg01no475_f14.g1 PHD_FILE: MSMg01no475_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:06 2005
(372 letters)
>mm_chr2_91115346_91116118
Length = 773
Score = 698 bits (361), Expect = 0.0
Identities = 370/373 (99%), Gaps = 1/373 (0%)
Strand = Plus / Plus
Query: 1 ttacaggtgaggctgcgctgctggacctgggaaaa-gtttgccttctactgtatctaata 59
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ttacaggtgaggctgcgctgctggacctgggaaaaagtttgccttctactgtatctaata 260
Query: 60 tgctgagtagccatgggcagctctttagagagcacttgggtttggcagggtagttactct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgagtagccatgggcagctctttagagagcacttgggtttggcagggtagttactct 320
Query: 120 ccatccctgagtttgggctaagcctctccctaaggtgataatgtgtctgcactgatttgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatccctgagtttgggctaagcctctccctaaggtgataatgtgtctgcactgatttgc 380
Query: 180 ctaagcttgttccttgtactgctctctcctcctcccaggttctgccaggcaggacttgtc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 ctaagcttgttccttgtactgctctctcctcctcccaggttctgccaggcaggacttgcc 440
Query: 240 ttttccttagtatccaggtggcttttaccccagcttccaccacaaacttccaacatgggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttccttagtatccaggtggcttttaccccagcttccaccacaaacttccaacatgggg 500
Query: 300 gtccccagccctctgcagtagccagccctcattctgtgggaggctctgactttgtgtttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtccccagccctctgcagtagccagccctcattctgtgggaggctctgactttgtgtttt 560
Query: 360 tactctccccact 372
|| ||||||||||
Sbjct: 561 tattctccccact 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 773
Length adjustment: 9
Effective length of query: 363
Effective length of database: 764
Effective search space: 277332
Effective search space used: 277332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
