Query= MSMg01no478_e22.b1 MSMg01no478_e22.b1 CHROMAT_FILE:
MSMg01no478_e22.b1 PHD_FILE: MSMg01no478_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:00 2005
(172 letters)
>mm_chr2_177875209_177875779
Length = 571
Score = 281 bits (145), Expect = 2e-80
Identities = 167/175 (95%), Gaps = 3/175 (1%)
Strand = Plus / Plus
Query: 1 ggaatgtggggattacaggtgggagccaccatatgacagtaatcagtcgacagatggctg 60
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 201 ggaatgtggggattacaggtgggagccaccatatgacactaatcagttgacagatggctg 260
Query: 61 gtttgcttgtgtttttggaccaccatgaagggtggtctcctgctcagtcttgaggggcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 gtttgcttgtgtttttggaccaccatgaagggtggtctcctgctcagtcttgaggtgcat 320
Query: 121 ctagtccatttattccagagagtttatggaaagaagg-aggg--ggagggaggga 172
||||| ||||||||||||||||||||||||||| ||| |||| |||||||||||
Sbjct: 321 ctagttcatttattccagagagtttatggaaaggagggagggagggagggaggga 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 571
Length adjustment: 8
Effective length of query: 164
Effective length of database: 563
Effective search space: 92332
Effective search space used: 92332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no478_e22.g1 MSMg01no478_e22.g1 CHROMAT_FILE:
MSMg01no478_e22.g1 PHD_FILE: MSMg01no478_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:00 2005
(607 letters)
>mm_chr2_178059919_178060924
Length = 1006
Score = 1081 bits (559), Expect = 0.0
Identities = 595/607 (98%), Gaps = 1/607 (0%)
Strand = Plus / Minus
Query: 1 gaaatctctcaagaattcacaccacctcaaggatggccatacccaagggctgtaaggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gaaatctctcaagaattcacaccacctcaaggatggccatacccaagggctgtaaggtca 747
Query: 61 gggtgagtggccaagggttgtaaggtcaggatggttgtgggcaaggctttaaggtccttg 120
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ggatgactggccaagggttgtaaggtcaggatggttgtgggcaaggctttaaggtccttg 687
Query: 121 caaatcaggattcaggttgtcaatgcataccttctctgacatttataagtaaatattttc 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 686 tgaatcaggattcaggttgtcaatgcataccttccctgacatttataagtaaatattttc 627
Query: 181 tccagaaaaacaatcctagcaggactttgttccctaatacctgattacacgcgttgcttg 240
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 626 ttcagaaaaacaatcctagcaggactttgttccctaatacctgattacacgcgttgattg 567
Query: 241 tgtgaagtgttcacctgtgtcaggtacttcttcctagccccaaatggcattcttcaagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgtgaagtgttcacctgtgtcaggtacttcttcctagccccaaatggcattcttcaagtc 507
Query: 301 tactacccagcagaagacagagaccggagggacttaatacactggcctgggcctggaaac 360
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tacaacccagcagaagacagagaccggagggacttaatacactggcctgggcctggaaa- 448
Query: 361 agtcaaactgctcagactctcctctctttacttgtgtccaggaccccaccgatgactatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agtcaaactgctcagactctcctctctttacttgtgtccaggaccccaccgatgactatg 388
Query: 421 gtcagctgcaccagggtagctgaattgccacaaagccccttggctggctattctaagaat 480
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtcagctacaccagggcagctgaattgccacaaagccccttggctggctattctaagaat 328
Query: 481 ctcacaggaccaagcacatctggctctggtaagttactggcccatctgccaagccaggcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctcacaggaccaagcacatctggctctggtaagttactggcccatctgccaagccaggcc 268
Query: 541 tgggaggccagactcttcttcccacagtactgtacccatagataacttgtggaaaagctc 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 267 tgggaggccagactcttcttcccacagtattgtacccatagataacttgtggaaaagctc 208
Query: 601 acctcta 607
|||||||
Sbjct: 207 acctcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1006
Length adjustment: 10
Effective length of query: 597
Effective length of database: 996
Effective search space: 594612
Effective search space used: 594612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
