Query= MSMg01no478_g07.b1 MSMg01no478_g07.b1 CHROMAT_FILE:
MSMg01no478_g07.b1 PHD_FILE: MSMg01no478_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:06 2005
(691 letters)
>mm_chr2_73648569_73649659
Length = 1091
Score = 1299 bits (672), Expect = 0.0
Identities = 684/688 (99%), Gaps = 2/688 (0%)
Strand = Plus / Plus
Query: 5 gaattccagtgtgcgtgagagggaggagaatttcaagcacgatgctgaaaagtttaaatt 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtgtgtgtgagagggaggagaatttcaagcacgatgctgaaaagtttaaatt 264
Query: 65 atgatttgaattttacatgccaatgtacttctagatagccaaagcagacatacaaatcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgatttgaattttacatgccaatgtacttctagatagccaaagcagacatacaaatcta 324
Query: 125 ttttattcaaattgttgaattatgatcaataccattttcaaagactgcacagtgctctta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttattcaaattgttgaattatgatcaataccattttcaaagactgcacagtgctctta 384
Query: 185 aggcacatagaaagcctcaacaggtaaagaagacattgagcaataaaaacaatggaacac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggcacatagaaagcctcaacaggtaaagaagacattgagcaataaaaacaatggaacac 444
Query: 245 atctgattttcaaaatgttgtcacaaatacattttaccccgtaaagaactgcagccagtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atctgattttcaaaatgttgtcacaaatacattttaccccgtaaagaactgcagccagtt 504
Query: 305 ttatttgagttgata-ttcagtgccatgaaatggtctgaggctctttgcttatgttggtc 363
||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 ttatttgagttga-acttcagtgccatgaaatggtctgaggttctttgcttatgttggtc 563
Query: 364 tattttacatggttgtctgcttagcagactgccccatccatgatgctagaagtcagcttc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tattttacatggttgtctgcttagcagactgccccatccatgatgctagaagtcagcttc 623
Query: 424 aaaagtactggctgaataaattgatgtgtaacaaaatgtagacactgggataggatagta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaaagtactggctgaataaattgatgtgtaacaaaatgtagacactgggataggatagta 683
Query: 484 agtatatgtcgaataatcttaactatgctgtgatacataactctttattgcaattgatgg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agtatatgtcgaataatcttaactatgctgtgatacataactctttattgcaattgatgg 743
Query: 544 taattagaccctatggtaataaattttaacaaatgcagctccccaaaatgaactacctac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taattagaccctatggtaataaattttaacaaatgcagctccccaaaatgaactacctac 803
Query: 604 ttacatatttaaattacagattaaaaaaaatgagaaagaatggaaaccaaactaaagatc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttacatatttaaattacagattaaaaaaaatgagaaagaatggaaaccaaactaaagatc 863
Query: 664 acactatattgatgggtaataatcagaa 691
||||||||||||||||||||||||||||
Sbjct: 864 acactatattgatgggtaataatcagaa 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_g07.g1 MSMg01no478_g07.g1 CHROMAT_FILE:
MSMg01no478_g07.g1 PHD_FILE: MSMg01no478_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:06 2005
(661 letters)
>mm_chr2_73695695_73696755
Length = 1061
Score = 1183 bits (612), Expect = 0.0
Identities = 643/664 (96%), Gaps = 19/664 (2%)
Strand = Plus / Minus
Query: 1 attctcgttccaaattaagtaattaatagacaaataaataaaatgtatatatagttattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 attctcgttccaaattaagtaattaatagacaaataaataaaatgtatatatagttattc 989
Query: 61 tcattccagatgagtgggtgaatgaatgaatgaatgaatgaatgaatgaatgaattggca 120
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 988 tcattccagatgagtggg------------tgaatgaatgaatgaatgaatgaattggca 941
Query: 121 aataaaatatatgtatagttatatattggcccacaaagatggcattctggataaaaagga 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 aataaa----atgtatagttatatattggcccacaaagatggcattctggataaaaagga 885
Query: 181 acttgctgtaaggctaaggacctgagttcagtccctagaacccacatagtagaaggaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 acttgctgtaaggctaaggacctgagttcagtccctagaacccacatagtagaaggaaag 825
Query: 241 aactgatttctgcaggttgttttttaacttccacagatatacacacttaaaagaaaaaaa 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 aactgatctctgcaggttgttttttaacttccacagatatacacacttaaaagaaaaaaa 765
Query: 301 aagaaatgaaatagaagctcgctctgtttttgctttaattaatagtttagtcctcattaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aagaaatgaaatagaagctcgctctgtttttgctttaattaatagtttagtcctcattaa 705
Query: 361 taataaactatttttgttataaacacttcagtcttgggtattacatttttcaggcaatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 taataaactatttttgttataaacacttcagtcttgggtattacatttttcaggcaatga 645
Query: 421 ttttgtgaggtacttaatatttatattgtatactatcactgcccaacacagcccagtgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ttttgtgaggtacttaatatttatattgtatactatcactgcccaacacagcccagtgaa 585
Query: 481 tgtcagcttcatgagttatatcttgctgaaattagcagtgacctattctccctttatatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tgtcagcttcatgagttatatcttgctgaaattagcagtgacctattctccctttatatt 525
Query: 541 aaatagtatttcttaggatgttgaaggtacttattattatta---gttgttgttgttgtt 597
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 524 aaatagtatttcttaggatgttgaaggtacttattattattagttgttgttgttgttgtt 465
Query: 598 gtttgagataggtcttactatgtagctctggttgtcctggaactcactatgtagatctgg 657
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gtttgagataggtctcactatgtagctctggttgtcctggaactcactatgtagatctgg 405
Query: 658 cctc 661
||||
Sbjct: 404 cctc 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
