Query= MSMg01no478_g21.b1 MSMg01no478_g21.b1 CHROMAT_FILE:
MSMg01no478_g21.b1 PHD_FILE: MSMg01no478_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:09 2005
(660 letters)
>mm_chr2_43837232_43838292
Length = 1061
Score = 1185 bits (613), Expect = 0.0
Identities = 649/661 (98%), Gaps = 1/661 (0%)
Strand = Plus / Minus
Query: 1 tttttaatgaagcccaacaagacacagagagagcgttgagatggtgagcaaatggtgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 730 tttttaatgaagcccaacaagacacagagagagcgttgagatggtgagcaaatggtgcac 671
Query: 61 gctccttcctcctggaggccatcttaccacaaaggatgccattttataaggagaagtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gctccttcctcctggaggccatcttaccacaaaggatgccattttataaggagaagtgaa 611
Query: 121 gagtaacatgaggtaataagttagtaccaccatggtcatttcagcttggttttcatacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gagtaacatgaggtaataagttagtaccaccatggtcatttcagcttggttttcatacaa 551
Query: 181 aaccaattttaacccattttcagggataactggattttcttttttgaagaagaacattgt 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 550 aaccaattttaacccattttcagggataactagattttcttttttgaagaagaacattgt 491
Query: 241 tttttgtgctctttagaatgtgaagttcctcagtgaaatctataaagcttacagaaccta 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tttttgtgctcattagaatgtgaagttcctcagtgaaatctataaagcttacagaaccta 431
Query: 301 ggaaagagag-tgaaaagatccccagttgtttctgtggtagaacacagagaaggcacaca 359
|||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggaaagagagaagaaaaggtccccagttgtttctgtggtagaacacagagaaggcacaca 371
Query: 360 ttttcatatcactgtcactcatagacatgctttttaacaaatgttgaagtttaacttatt 419
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttttcatatcactgtcactcacagacatgctttttaacaaatgttgaagtttaacttatt 311
Query: 420 atagcaatcaagatagaaatcatttaaaatggggcttcattattgaagtgaaaataaata 479
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 310 atagcaatcaagatagaaatcacttaaaatggggcttcattattgaagtgaaaataaata 251
Query: 480 aatctgcattacttgtacaagtaaaatgtgttttcatatacctctggtcattttttaaaa 539
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 250 aatctgcattacttgtacaagtaaaatatgttttcatatacctctggtcatttttcaaaa 191
Query: 540 gatttatttatttattatatgtaggtacactgtagctgttttcagagatataccagaaga 599
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 190 gatttatttatttattatatgtaggtacactgtagctgttttcagacatataccagaaga 131
Query: 600 gggcatcagatctcattacagatggttgtgagccaccatgtggttgctgggatttgaact 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gggcatcagatctcattacagatggttgtgagccaccatgtggttgctgggatttgaact 71
Query: 660 c 660
|
Sbjct: 70 c 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1061
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1051
Effective search space: 683150
Effective search space used: 683150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_g21.g1 MSMg01no478_g21.g1 CHROMAT_FILE:
MSMg01no478_g21.g1 PHD_FILE: MSMg01no478_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:09 2005
(667 letters)
>mm_chr2_43701849_43702915
Length = 1067
Score = 1210 bits (626), Expect = 0.0
Identities = 656/668 (98%), Gaps = 8/668 (1%)
Strand = Plus / Plus
Query: 1 tcaggtgccgcgaattgacttgatgatatccttcagttgcagtcctgcaattttatcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcaggtgccgcgaattgacttgatgatatccttcagttgcagtcctgcaattttatcatc 256
Query: 61 ttgggcaagactcttgggtggttctacttcatattctcttctattcaaatatcaatctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttgggcaagactcttgggtggttctacttcatattctcttctattcaaatatcaatctcc 316
Query: 121 tgtatatatgcgctctaactggtccccaaatcccctatgcagacagctatcatctactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgtatatatgcgctctaactggtccccaaatcccctatgcagacagctatcatctactcc 376
Query: 181 tttttatgaatggtattcagaacaactcagcaaaataattgtttgtaataatgtgtgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tttttatgaatggtattcagaacaactcagcaaaataattgtttgtaataatgtgtgtat 436
Query: 241 taatgtgtcctataatgcataaacagctttgtattcaaaacctcatgtttcttgcaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 taatgtgtcctataatgcataaacagctttgtattcaaaacctcatgtttcttgcaatgt 496
Query: 301 ccaatcaatattagtacacagatatgtgttgtggtgccactgttaaagaccatttccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccaatcaatattagtacacagatatgtgttgtggtgccactgttaaagaccatttccttc 556
Query: 361 caagtgttgcctacttgataccatgtatctgtaccaaattttattttcacaaatctccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caagtgttgcctacttgataccatgtatctgtaccaaattttattttcacaaatctccca 616
Query: 421 gacacaaattcttctaagttatctctaactcttcaaaaacctaaaatattgcaggaaatc 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 617 gacacaaattcttctaagttatctctaactcttcaaaaacctaaaacattgcaggaaatc 676
Query: 481 acatataatttttttttggttttttgttt-gttt-gttt-gttttgaggg---ttttttt 534
||||||||||||||| | |||||||||| |||| |||| |||||||||| |||||||
Sbjct: 677 acatataatttttttgt--ttttttgttttgttttgttttgttttgagggattttttttt 734
Query: 535 gtttgcttttgttttgttttgtttttcccagttagaagttctccctgggaaatgtacaca 594
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 735 gtttgcttttgttttgttttgtttttcccaggtagaagttctccctgggaaatgtacaca 794
Query: 595 ccagttaagattgctcgagcatttattctgttccactgccttgctctcttgaaagacagc 654
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 795 ccagttaagattgctcgagcatttattctgttccagtgccttgctctcttgaaagacagc 854
Query: 655 agcatctc 662
||||||||
Sbjct: 855 agcatctc 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
