Query= MSMg01no478_i04.b1 MSMg01no478_i04.b1 CHROMAT_FILE:
MSMg01no478_i04.b1 PHD_FILE: MSMg01no478_i04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:15 2005
(626 letters)
>mm_chr2_135886178_135887205
Length = 1028
Score = 1147 bits (593), Expect = 0.0
Identities = 617/625 (98%), Gaps = 2/625 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaa-cta-tctctaatgagataggctcaaggacagtgaagaacttggtcctat 61
|||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 204 ggaattccaaactaatatctaatgagataggctcagggacagtgaagaacttggtcctat 263
Query: 62 ctttcttggagctccagtcctgggattgcagcaccaataggaggcataggttctgagcta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttcttggagctccagtcctgggattgcagcaccaataggaggcataggttctgagcta 323
Query: 122 agcagagagctctgcctaagttagcagcaatgagtatgcatccatcctaactgctgcctt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcagagagctctgcctaagttagcagcaatgagtatgcatccatcctaactgctgcctt 383
Query: 182 gcttctcccgcagttaataagtacatcgccagctctcatcacctctctgccttggtcacc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcttctcccgcagttaataagtacatcgccagctctcatcacctctctgccttggtcacc 443
Query: 242 ccagctgggatgtcctatgagtgtcaggtttattagaccatttctctggcctccagtgac 301
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 444 ccagctgggatgtcctatgagtgtcaggctcagcagaccatttctctggcctccagtgac 503
Query: 302 cctcagaagactgtcaccatgatcctgtccgcagtgcacatccagccctttgatatcatc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cctcagaagactgtcaccatgatcctgtccgcagtgcacatccagccctttgatatcatc 563
Query: 362 tctgactttgtcttcagtgaaggtaggttaggctggcggtaggaaagggaaaggaggatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctgactttgtcttcagtgaaggtaggttaggctggcggtaggaaagggaaaggaggatt 623
Query: 422 taaagagggctgaaaagaggggcttactggcctccctcccgggatggtgttacctttgtt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taaagagggctgaaaagaggggcttactggcctccctcccgggatggtgttacctttgtt 683
Query: 482 tcttctcagcagttttcacaagatgtagacgttataaggtttctgaaatacccatccctg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcttctcagcagttttcacaagatgtagacgttataaggtttctgaaatacccatccctg 743
Query: 542 tcccaaccctttgcctctttattctcttactcacttgtataggagaaattatttaaaggc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcccaaccctttgcctctttattctcttactcacttgtataggagaaattatttaaaggc 803
Query: 602 aatttgatattctgattctcatagg 626
|||||||||||||||||||||||||
Sbjct: 804 aatttgatattctgattctcatagg 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1028
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1018
Effective search space: 627088
Effective search space used: 627088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_i04.g1 MSMg01no478_i04.g1 CHROMAT_FILE:
MSMg01no478_i04.g1 PHD_FILE: MSMg01no478_i04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:15 2005
(633 letters)
>mm_chr2_136070495_136071520
Length = 1026
Score = 1046 bits (541), Expect = 0.0
Identities = 609/635 (95%), Gaps = 11/635 (1%)
Strand = Plus / Minus
Query: 1 tgtgataaaggtgataggagccttcacccactgagtgagccatcttgccactcctaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 826 tgtgataaaggtgataggagccttcacccactgagtgagccatcttgccactcttaaagt 767
Query: 61 ttagaggga-tttttttccttaatttaagaagttatacctcctttataaataactgatgt 119
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 766 ttagagggattttttttccttaatttaagaagttatacttcctttataaataactgatgt 707
Query: 120 acttttcaagattatccttttatttggtttgttttgaatgtcagttaatgagagaatatt 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 acttttcaagagtatccttttatttggtttgttttgaatgtcagttaatgagagaatatt 647
Query: 180 cattaaacaatttgtgcagtggatgctttgggtgtaaaattaattt-attctgttcatta 238
|||||||||||||||||||||||||||||||||||||||||||||| || || ||||||
Sbjct: 646 cattaaacaatttgtgcagtggatgctttgggtgtaaaattaatttcctt-tgatcatta 588
Query: 239 gtcctttttatttactaaaaaatattctctgtcaaagacaaatactattagaggccactg 298
|||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gtcc-tctgaattactaaaaaatattctctgtcaaagacaaatactattagaggccactg 529
Query: 299 agtattcctcatttgaactctggttgtaatacatataagtcaattacagatgggttggaa 358
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 528 agtattcctcatttgaactctggttgtaatacgtataagtcaattacagatgggttggaa 469
Query: 359 atctaaaccaagcaggatatatgtgctattttgtgacagttgctaagtcttctaaataat 418
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 468 atctaaaccaagcaggatatatgtgcta--atgtgacaggtgctaagtcttctaaataat 411
Query: 419 ggtacagaaataaacacagtggagaaagatatcgacattggactaagaaacatgactaaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggtacagaaataaacacagtggagaaagatatcgacattggactaagaaacatgactaaa 351
Query: 479 catctctgagagtgaaaatgaaaacagtaaatagaaatgtttacatgtacatacttaata 538
||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||
Sbjct: 350 catctctgagagtga-----aaaacggtacatagaaatgtttacgtgtacatacttaata 296
Query: 539 aaagacttgtattaagaatcaatagtgaatggataagatatagggaaagaatgtaaaagg 598
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 295 aaagacttgtattaagaatcaatagtgaatgtataagatatagggaaagaatgtaaaagg 236
Query: 599 aacatgggtaagtgggttaaacaggtaccccatag 633
|||||||||||||||||||||||||||||||||||
Sbjct: 235 aacatgggtaagtgggttaaacaggtaccccatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1026
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1016
Effective search space: 632968
Effective search space used: 632968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
