Query= MSMg01no478_j02.b1 MSMg01no478_j02.b1 CHROMAT_FILE:
MSMg01no478_j02.b1 PHD_FILE: MSMg01no478_j02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:19 2005
(647 letters)
>mm_chr2_89282670_89283716
Length = 1047
Score = 1237 bits (640), Expect = 0.0
Identities = 646/648 (99%), Gaps = 2/648 (0%)
Strand = Plus / Minus
Query: 1 tgtgtttgggaaaaaacaaacactattgttctgctaaatgaccatagcaataaaaatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 tgtgtttgggaaaaaacaaacactattgttctgctaaatgaccatagcaataaaaatgac 915
Query: 61 tcctagtgatattctgctattctcaaagatcagaacctcacgtagtatcaagaagcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tcctagtgatattctgctattctcaaagatcagaacctcacgtagtatcaagaagcttcc 855
Query: 121 tttgcagtagatgagaactaatgcagacatcaatgtgagagtgtgagactttgaaacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tttgcagtagatgagaactaatgcagacatcaatgtgagagtgtgagactttgaaacact 795
Query: 181 cagtccatatggggtgtcttcatcaaaaccctcccctcagtgttcagagagctatgtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 cagtccatatggggtgtcttcatcaaaaccctcccctcagtgttcagagagctatgtgga 735
Query: 241 agaagggcagaaagatggtcagagacaaattatgaatgactccaaggaaaatgtactatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 agaagggcagaaagatggtcagagacaaattatgaatgactccaaggaaaatgtactatt 675
Query: 301 tcactctagatttgtagaaattttctttcaacatcacatttgttaatattttaatggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tcactctagatttgtagaaattttctttcaacatcacatttgttaatattttaatggaat 615
Query: 361 tttgaaaaacatttttattaagtctttgagaatttttattcatagcgttttggtcatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tttgaaaaacatttttattaagtctttgagaatttttattcatagcgttttggtcatatt 555
Query: 421 tacccttttctcttattcccctcccagttctaccctcattccatagtgtatccttacgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tacccttttctcttattcccctcccagttctaccctcattccatagtgtatccttacgca 495
Query: 481 tttattttcaaacccattgagtgcaattaaaactgcctatgtactcttgggtgtgtggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tttattttcaaacccattgagtgcaattaaaactgcctatgtactcttgggtgtgtggct 435
Query: 541 aaccactggaactggctagacttactgcagacatatattaaaacgaatgacaacaatc-a 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 434 aaccactggaactggctagacttactgcagacatatattaaaacgaatgacaacaa-caa 376
Query: 600 agcaatctcatggcagctactaatcctatagcttcatcccttactctg 647
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agcaatctcatggcagctactaatcctatagcttcatcccttactctg 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_j02.g1 MSMg01no478_j02.g1 CHROMAT_FILE:
MSMg01no478_j02.g1 PHD_FILE: MSMg01no478_j02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:19 2005
(677 letters)
>mm_chr2_89153952_89155028
Length = 1077
Score = 1154 bits (597), Expect = 0.0
Identities = 633/645 (98%)
Strand = Plus / Plus
Query: 22 aaaacctagacgaaaggagttctgactatttatttgaaattttaagataatggagaatgt 81
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 222 aaaacctagacgaaaggagttctgaccatttatttgaaaatttaagataatggagaatgt 281
Query: 82 caacatcaagagtgttctctggtagccattcattgaagccagcccacagaacaatatctg 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 caacatcaagagtgttctctggtagccattcattgaagccagcccacagaacaatatctg 341
Query: 142 ggaatgaagaaaatttgttgtaggtacccagggacaattgatgaccgtgtttagacttag 201
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggaatgaagaaattttgttgtaggtacccagggacaattgatgaccgtgtttagacttag 401
Query: 202 cattgggcccatctcccagcccttgccagggacctagcaactatgatgcagtgcccaagg 261
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 402 cattgggcccatctcccagcctttgccagggacctggcaactatgatgcagtgcccaagg 461
Query: 262 tgatagtctgaggttaaacagtagaggggggaaatcctggaaaggacatctccgaatctg 321
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttatagtctgaggttaaacagtagaggggggaaatcctggaaaggacatctccgaatctg 521
Query: 322 aaggctccctggtaaaggaagagatgggcttgccctggcttggctgaggcttggcagagt 381
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aaggctgcttggtaaaggaagagatgggcttgccctggcttggctgaggcttggcagagt 581
Query: 382 atcgcagaggttatggacacggaagaggcacccactaccatttaggctgtggctgggaaa 441
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 582 atcgcagaggttatggacacggaagaggcacccactaccatttcggctgtggctgggaaa 641
Query: 442 tggcaacttaccctaacccaaaagttgatcctgtcaggcgatgagagtgataggagagga 501
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 642 tggcaacttaccctaacccaaaagttgatcctgtcaggtgatgagagtgataggagagga 701
Query: 502 gcagtcctgacacaacctggaacctggtgtattgggctgagggcttgtcttagttagggt 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gcagtcctgacacaacctggaacctggtgtattgggctgagggcttgtcttagttagggt 761
Query: 562 tttactgctgtgaacagataccatgaccaaggcaactcttataagaacaacatttaattg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tttactgctgtgaacagataccatgaccaaggcaactcttataagaacaacatttaattg 821
Query: 622 agtctgacttacaggttcagaggttcagtccattatcatcaaggc 666
||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 822 agtctgatttacaggttcagaggttcagttcattatcatcaaggc 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
