XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGAAT
TTCCCACAGCAATGGATTTTCAGAATTTTACTCAAAATGGACAGAAATGT
CAGTGTTCTATACGTTTACGCACATGTCTGCTGTTGTACCTGAGACTACT
TCTGACTTAGAAAGCAGAGTCTCTCCCATGCTAATCGTACTGTCCCTAAG
TTCTACCTGAAGGCAACACATTTAGCTTTAGGTAACGTTGTAGAACTTTG
TGAAAAGGTACATGCTATGAATCTAACTGAATGTCCTTGAATGAAAAATA
AAGGAAATATAAAGGCAAAGAACAGTAAACGTGACTGCTCCTAGGTGTGG
TGGAGGAGAGAGTTTGTTGCAGATCAAAGGAAGAGCAGAATTAGAGGTAG
GGACCTGGGAATAGTGGACATGACCCTGAGCTGAGCACCATGGGAGAAGT
GGGGGAGGGAAAGGGGAGTAAGGGTGCAGCAGTCAGGGGATCGAAAGTAC
AAAAGGAGTGGTAACCAAAATAGATGGATTGTGTGAAGAAGACCAGCCCA
AGCTTCTGAGCCTGGAGAGTTCAGGAGAGAGGGCTGGGTATGAGAGCCAG
GAGGGCTCTGTAACAGCTGAAGGATTGCTGTAGCAGCCAGGTCTGCTTTA
ATGTGTTAAATAGTCACCTCTGCCATTTGTTCCAGGTTTGATTTATTGGC
ATTGAAGCACCTTTTATTTGGGGGGTACCTTGGTTCACTTTTTATC

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCTGGTTTTGCTGGAGACTGTTGTGTCACGTGATATTTT
TCTGGACACTGTCTTATGAGAGGACGCTTTGTTGAAGCAGACACGTGGAA
GAATGTTTCGCTAACAAAGGATGTGGTGTTTTTCTAGATGCTGTCTGGTG
AGAGGGCATGTGATTTTTTGCTGGAGCAGATGCTTGAGAGTAAGCATGAT
GTTTGGAAAGAAGGTAAGTATATCCGAATAGACGGTGGACAGCACTCTGG
CATTGGTTTGCCTTGTTGATCTTCTCTGATCTTCCTTTGTTGTGACTTTG
TAGAAAGAAATGAACCAAAGAACTTCTGTCTGCATCTTGTCACTTCAGCA
GACTCATGCTGATCGGCAGAGCCTCACCCTTTCTTCTGGATCAAGCTGCT
GCTGCTGCTGCTGCTGTGTGTTTGGTATTTTACTAGTGGACAGGACTGCT
GACAATGAAGATTGAAATCGCCCCACAGAACTATCTCTAAACAGGTCTGT
GGTCCCCCTTGTCCTGTTAGCTATCTTCCTCCCCTACCTCTGGTGAGTGG
GCTAAAAGGAAGGTTGAAGCATTTAAGAATACTTAAAGTGAGTTTTGAAA
AACATAAGGCTACAAACAAGTTTGTGTTTTACAAAATACTGCACACAGAG
ACTTCTTNAAACTTTTATAACACAAAGAGTATTAGTAAAGTCAACCCTN

Query= MSMg01no478_p03.b1 MSMg01no478_p03.b1 CHROMAT_FILE:
MSMg01no478_p03.b1 PHD_FILE: MSMg01no478_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:46 2005
         (541 letters)



>mm_chr2_83099133_83100073
          Length = 941

 Score =  919 bits (475), Expect = 0.0
 Identities = 527/557 (94%), Gaps = 20/557 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagcaatggattttcagaattttactcaaaatggacagaaatgtcagtgttctatacgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagcaatggattttcagaattttactcaaaatggacagaaatgtcagtgttctatacgtt 240

                                                                       
Query: 61  --------------------tacgcacatgtctgctgttgtacctgagactacttctgac 100
                               ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgacacgatgtcagtgtttacgcacatgtctgctgttgtacctgagactacttctgac 300

                                                                       
Query: 101 ttagaaagcagagtctctcccatgctaatcgtactgtccctaagttctacctgaaggcaa 160
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttagaaagcagagtctctcccacgctaatcgtactgtccctaagttctacctgaaggcaa 360

                                                                       
Query: 161 cacatttagctttaggtaacgttgtagaactttgtgaaaaggtacatgctatgaatctaa 220
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 cacatttagctttaggtaacgttgtagaactttgtggaaaggtacatgctatgaatctaa 420

                                                                       
Query: 221 ctgaatgtccttgaatgaaaaataaaggaaatataaaggcaaagaacagtaaacgtgact 280
           |||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 421 ctgagtgtccttgaatgaaaaataaaggaaataaaaaggcaaagaatagtaaacgtgact 480

                                                                       
Query: 281 gctcctaggtgtggtggaggagagagtttgttgcagatcaaaggaagagcagaattagag 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 gctcctaggtgtggtggaggagagagtttgttgcagatcaaaggaagagcaaaattagag 540

                                                                       
Query: 341 gtagggacctgggaatagtggacatgaccctgagctgagcaccatgggagaagtggggga 400
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtagggacctcggaatagtggacatgaccctgagctgagcaccatgggagaagtggggga 600

                                                                       
Query: 401 gggaaaggggagtaagggtgcagcagtcaggggatcgaaagtacaaaaggagtggtaacc 460
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gggaaaggggagtgagggtgcagcagtcaggggatcgaaagtacaaaaggagtggtaacc 660

                                                                       
Query: 461 aaaatagatggattgtgtgaagaagaccagcccaagcttctgagcctggagagttcagga 520
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaaatagttggattgtgtgaagaagaccagcccaagcttctgagcctggagagttcagga 720

                            
Query: 521 gagagggctgggtatga 537
           |||||||| ||||||||
Sbjct: 721 gagagggcggggtatga 737


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space:   494361
Effective search space used:   494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)