Query= MSMg01no478_p06.b1 MSMg01no478_p06.b1 CHROMAT_FILE:
MSMg01no478_p06.b1 PHD_FILE: MSMg01no478_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:47 2005
(574 letters)
>mm_chr2_132395998_132396971
Length = 974
Score = 982 bits (508), Expect = 0.0
Identities = 557/574 (97%), Gaps = 2/574 (0%)
Strand = Plus / Plus
Query: 1 cataaagcatgcgcacatgcacgtacgcaagcacagtcagttgctgtggcggttgctaca 60
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 201 cataaagcatgcgcacatgcacgcacgcaagcacagtcagctgctgtggcggttgctaca 260
Query: 61 acagacatgttagctgtacagaaggagtcaatcatggagtctttggacacatttactcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagacatgttagctgtacagaaggagtcaatcatggagtctttggacacatttactcta 320
Query: 121 ctcctgatctgtaccaagctctgagctaggttccagaattcagcatcaagattttatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||
Sbjct: 321 ctcctgatctgtaccaagctctgagctaggttccagaattcagcatcaagacatgaccat 380
Query: 181 gttttcataaagcttagcatttgtcacaggtcaaattattcaagtaatttaaaaatcttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gttttcataaagcttagcatttgtcacaggtcaaattattcaagtaatttaaaaatctct 440
Query: 241 ggtagatttacaaaaacagtgccaaaacctgaggaaatttctcagaagccctctcaccgt 300
|| |||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 441 ggaagatctacaaaaacagtgccagaacctgaggaaatttctcagaagccctctcgccgt 500
Query: 301 cctcaccttgataatggtgagagtaaaagaagaagaaaagaaaatgctcggggctggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctcaccttgataatggtgagagtaaaagaagaagaaaagaaaatgctcggggctggaga 560
Query: 361 gatggctcagtggttaagatcaccaactgctcttccaacaggtcctgagttcagttccca 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 561 gatggctcagtggttaagatcaccaactgctcttccaacagatcctgagttcaattccca 620
Query: 421 caaccacatggtggctcacaaccatctgtagtgggatttgatgccctcttctggtgtgta 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaccacatggtagctcacaaccatctgtagtgggatttgatgccctcttctggtgtgta 680
Query: 481 ctcacaaagataaagtaaaatctttaaaataaataaaatttttaaaaaagaaaaaaaaag 540
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 ctca--aagataaagtaaaatctttaaaattaataaaatttttaaaaaagaaaaaaaaag 738
Query: 541 aaaaagaaaattctcaaaagaggaaatggggaga 574
||||||||||||||||||||||||||||||||||
Sbjct: 739 aaaaagaaaattctcaaaagaggaaatggggaga 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_p06.g1 MSMg01no478_p06.g1 CHROMAT_FILE:
MSMg01no478_p06.g1 PHD_FILE: MSMg01no478_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:47 2005
(641 letters)
>mm_chr2_132567678_132568722
Length = 1045
Score = 739 bits (382), Expect = 0.0
Identities = 414/427 (96%), Gaps = 4/427 (0%)
Strand = Plus / Minus
Query: 219 tgggcatcctccctagtcacaattattttcccaggggacagcattgcccttttagaaatt 278
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 1045 tgggcatcctccctagtcacaatcatagccccaggggacagcattgcccttttagaaatt 986
Query: 279 gtcacgaggcatcagtgctgagatctggtaaatactgtgggtgatcagaaaggaaacata 338
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 985 gtcacgaggcatcagtgctgagatctggtaaataatgtggatgatcagaaaggaaacata 926
Query: 339 gcctgtggtaagaggtaaggatttgacacagaaaggaaaggactgcattgtgcctcacaa 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 gcctgtggtaagaggtaaggatttgacacagaaaggaaaggactgcattgtgcctcacaa 866
Query: 399 gctaatttaaaaagcaatcctcacacaatcagttgtgtgtaatgccaggcaacaacatgg 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gctaatttaaaaagcaatcctcacacaatcagttgtgtgtaatgccaggcaacaacatgg 806
Query: 459 acagacttctaaatggtcatcttgcaaggtggatttcagttttggccttgtaaaagt--- 515
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 805 acagacttctaaatggtcaccttgcaaggtggatttcagttttggccttgtaaaagttag 746
Query: 516 -tagctcatggtcaaagatctgaaactggaatgtctttgtcctgacagaagaactgcttg 574
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctagctcatggtcaaagatctgaaactggaatgtctttgtcctgacagaagaactgcttg 686
Query: 575 taaatctangacaggagccatgtgatcttgagcaaattactcaacatctatgaatctcaa 634
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 685 taaatctaggacaggagccatgtgatcttgggcaaattactcaacatctatgaatctcaa 626
Query: 635 ctctcca 641
|||||||
Sbjct: 625 ctctcca 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1045
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1035
Effective search space: 653085
Effective search space used: 653085
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
