Query= MSMg01no481_e14.b1 MSMg01no481_e14.b1 CHROMAT_FILE:
MSMg01no481_e14.b1 PHD_FILE: MSMg01no481_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:53 2005
(154 letters)
>mm_chr2_43955878_43956431
Length = 554
Score = 288 bits (149), Expect = 9e-83
Identities = 152/153 (99%)
Strand = Plus / Plus
Query: 2 ctaagggtacagaaacaggatttaagatgcctcttttagtctactgttcagaactaatct 61
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 202 ctaagggtacagaaacaggatttaagatgcctcttttagtctactggtcagaactaatct 261
Query: 62 agctggaaggttttgaatatgcctctgcttatggcactggcaaagcaaatgtgtcttctt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agctggaaggttttgaatatgcctctgcttatggcactggcaaagcaaatgtgtcttctt 321
Query: 122 ctacccatgaacctatggtgatgggaggtgatg 154
|||||||||||||||||||||||||||||||||
Sbjct: 322 ctacccatgaacctatggtgatgggaggtgatg 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 554
Length adjustment: 8
Effective length of query: 146
Effective length of database: 546
Effective search space: 79716
Effective search space used: 79716
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no481_e14.g1 MSMg01no481_e14.g1 CHROMAT_FILE:
MSMg01no481_e14.g1 PHD_FILE: MSMg01no481_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:53 2005
(648 letters)
>mm_chr2_44140962_44142009
Length = 1048
Score = 1087 bits (562), Expect = 0.0
Identities = 607/624 (97%), Gaps = 6/624 (0%)
Strand = Plus / Minus
Query: 1 cctagcatggtactacagggatatgaatgcttgggatgaacctgtcagctggataacata 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 cctagcatggtactacagggatatgaatgcttgcgatgaacctgtcagctggataacata 562
Query: 61 ccaatcctaaagaagagaacactgaagaattcagattttgttggttcccatgaatgtcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaatcctaaagaagagaacactgaagaattcagattttgttggttcccatgaatgtcca 502
Query: 121 ccgttgtggaatacaactcaaatttcaatgtaattttatcttatttcaaggttttacctt 180
|| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 501 ccattgtggaatacaactcaaatttcaatgtaattttatcttagttcaaggttttacc-t 443
Query: 181 ttttcagtaatacaatgtttataccttcattaaaaactgttgccttaagaaaatagatta 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttttcagtaatgcaatgtttataccttcattaaaaactgttgccttaagaaaatagatta 383
Query: 241 accatgagcttatcggaattcacactttgatgtttgagtgtagtttggttttattcgttt 300
|||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 382 accatgagcttatcagaattcacactttgatgtttgagtataatttggttttattcgttt 323
Query: 301 atatttgtgaaagcatgactggataccatcacagcacacatgaagatagcaccatgtctg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 322 atatttgtgaaagcatgactggataccatcacagcacacatgaagatagcaccatg--tg 265
Query: 361 ---cttggagtgcagacttagaataaaaagattctacatttaaggctgataggtggcatg 417
|||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||
Sbjct: 264 gtacttggagtccagacttagaataaaaagattctacgtttaaggcttataggtggcctg 205
Query: 418 aaggaagatgtgtccacagggcatagctgttatggatgcaactaattgattttgagttga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaggaagatgtgtccacagggcatagctgttatggatgcaactaattgattttgagttga 145
Query: 478 ttcggaggcctgctccaagaaagggagttcagaccttgaatagaccaggtatatttaagt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttcggaggcctgctccaagaaagggagttcagaccttgaatagaccaggtatatttaagt 85
Query: 538 ccatgactgtagaaacataggccctatttgttaagtggaaatgttgtcaaatttgccttt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ccatgactgtagaaacataggccctatttgttaagtggaaatgttgtcaaatttgccttt 25
Query: 598 taaatatttatttcaatacccttt 621
||||||||||||||||||||||||
Sbjct: 24 taaatatttatttcaatacccttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
