CCTCTCCCCCCAAATCCTGTTTTTTTCTTCGTGTCCCCCCTTAATTTTCT
CCTCTTTGATCTAGCCCCCTGCGACTCGGTAGCTACAAAACTTCCTTTAT
CGAAGAAAGTGTTCAAAATTACTGACTTTCGCCTCGCCCCTACAATGTAT
TGCCCATCAGGAACGGAGACCCGCCCTTACCTGTCCTCTCGGAAGACAAT
CGTCGTCTTCTGATCTCTTACACTCCTTTGCCCTATTCTTACCTTTCCCC
GAGAAGAGTATGTGCTCTCTCACGAATTTCTCGCTCCTTCCCCCCTCCCT
TTTTCCTGCTATCTGGGTTGGGACCGGCNCCCAGGTTCAAATTGCGCCGC
TAATCGATAGTCTTCGTCC

TTTTTTTTATCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTGTGAGGTGTT
TCACACACTCTCCTATACCTAGAGTATTTGCTTCCCAGATTCATGGGGTG
ACTCTGGGATGTGAGATAATGGCTTTAGGAGTCACTGCACACTGGGGCTG
TGGCCAGGGTCACTGATGGTGAAAGGCCAACGTGCATGGACTAGCTCACC
CTAAAGGACATTTGTTTCTTTTTGAGCTTGGAGCTCTGGTCATTTTCCTT
TCTGTCATCTTTGTAGGGTAGAATATCAATGTTGGTATTTTTTAATAATT
AAAAGCTGTGTCTCTGTATTTCCACATCAGGGCCAGCATGTACCTGTACC
TTAGAGGCAGATATGCTGCTCGTTTTGAGGACATCTATGCTTACGGCCAT
GTGCCTGCTTTCCCCTTGTGTCTGTGTAGTTTGAGAAGAACCAGAAGATG
ATTGTCTTTTTCTCAAGTTGTGAATTGGTGGAGTTCCACTACAGCCTCTT
CCTTCACACCCTGCTTTGCCACTCAGGGACCCCTACTTCAGAGCATCTGC
CATCTGCCTCCTGGNCACTGAAATTCCTTCGGCTGCATGGCAACATGGAA
CAGGAGGTGAGCCGGCTCTTCCCCACCCACCCCCCATGCCATGAACCTGG
TTAACTAGAGAGTCCTAGTGCACTTCT

Query= MSMg01no483_a05.g1 MSMg01no483_a05.g1 CHROMAT_FILE:
MSMg01no483_a05.g1 PHD_FILE: MSMg01no483_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:03 2005
         (583 letters)



>mm_chr2_28715644_28716625
          Length = 982

 Score = 1091 bits (564), Expect = 0.0
 Identities = 578/583 (99%), Gaps = 1/583 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtgtgaggtgtttcacacactctcctatacctagagtatttgcttcccagattcatgg 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgtgaggtgtttcgcacactctcctatacctagagtatttgcttcccagattcatgg 260

                                                                       
Query: 61  ggtgactctgggatgtgagataatggctttaggagtcactgcacactggggctgtggcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ggtgactctgggatgtgagataatggctttaggagtcactgcacact-gggctgtggcca 319

                                                                       
Query: 121 gggtcactgatggtgaaaggccaacgtgcatggactagctcaccctaaaggacatttgtt 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gggtcactaatggtgaaaggccaacgtgcatggactagctcaccctaaaggacatttgtt 379

                                                                       
Query: 181 tctttttgagcttggagctctggtcattttcctttctgtcatctttgtagggtagaatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctttttgagcttggagctctggtcattttcctttctgtcatctttgtagggtagaatat 439

                                                                       
Query: 241 caatgttggtattttttaataattaaaagctgtgtctctgtatttccacatcagggccag 300
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 caatgttggtattttttaataattaaaagctgtgtctccgtatttccacatcagggccag 499

                                                                       
Query: 301 catgtacctgtaccttagaggcagatatgctgctcgttttgaggacatctatgcttacgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catgtacctgtaccttagaggcagatatgctgctcgttttgaggacatctatgcttacgg 559

                                                                       
Query: 361 ccatgtgcctgctttccccttgtgtctgtgtagtttgagaagaaccagaagatgattgtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccatgtgcctgctttccccttgtgtctgtgtagtttgagaagaaccagaagatgattgtc 619

                                                                       
Query: 421 tttttctcaagttgtgaattggtggagttccactacagcctcttccttcacaccctgctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttttctcaagttgtgaattggtggagttccactacagcctcttccttcacaccctgctt 679

                                                                       
Query: 481 tgccactcagggacccctacttcagagcatctgccatctgcctcctggncactgaaattc 540
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 680 tgccactcagggacccctacttcagagcatctgccatctgcctcctggccactgaaattc 739

                                                      
Query: 541 cttcggctgcatggcaacatggaacaggaggtgagccggctct 583
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttcggctgcatggcaacatggaacaggaggtgagccggctct 782


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 982
Length adjustment: 10
Effective length of query: 573
Effective length of database: 972
Effective search space:   556956
Effective search space used:   556956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)