TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTAGAATTTCCCTGGCACCCCATGGACTCACCAGCAGCTCGGTTC
TTCCCTGGTTTGCAAAGAGTGACCCAGAGTTCAGGACAGATGGTTGCTTA
CAGTGCCTGTGTATGTGTCCTGGCCAGCATGGCAGGCTTGCTCCTCAGCT
TAACCCAAGCTCTCTTTGGCCTGCATCCCTGTTTTTAGGCCCTGACTCCC
GCTATGACTGGATTACTGTCTTTTTTTTTCTGTCCATATGTATGGACAAT
TTTATGTTCTCAAATCTTCATGTCCCTTGAAACAATAGTTTGTTTGGATT
ATAAAACGTAGCTGCTTGGATTTGAGTGTGTGTGTTCCCTACTAAACTCA
TATATTGGCATATATGTATTACCAAGGGGAGATTGTGGTCTTTGAGAAAA
AATATTTTGAGGTATGGCCTTTTCGGCATAATGGGGTTTGAGTTCCTATT
GGAAAAAAAATCCCCAAATCTGCTTTGTCCTTTCTGCTATATGATGATGC
TGGGAAAGTTCCCATCTATGAACTATAGTACCAGCCCTGAATCTATGATT
TTGAAAATCAGATATTAAACTTGCTTTTAAACTTAGTTGTGGAACTTGAA
GAAGTAAGCTTGTACTGTTTTGCTATAGTAGTCTGACAGTACTAAGACAG
TAACCAAATCTTGGAATCCTCCTGTACTCCTCTTGGTTATATATATCACA
GTAAGAACAGAAGTCCAGTGGT

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACTTGAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAGA
TCAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAGAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAG
TGGATATTAGCCCAAAACCTAAGATTACCCAGATATAAGATACAATTTCC
TAAACACTTGAAACTCAAGAAAAAGAAGACTGAAGTGTGAACACTATGCC
CCTCCCTA

Query= MSMg01no484_a16.b1 MSMg01no484_a16.b1 CHROMAT_FILE:
MSMg01no484_a16.b1 PHD_FILE: MSMg01no484_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:27 2005
         (651 letters)



>mm_chr2_44150165_44151219
          Length = 1055

 Score =  855 bits (442), Expect = 0.0
 Identities = 481/496 (96%), Gaps = 4/496 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caccccatggactcaccagcagctcggttcttccctggtttgcaaagagtgacccagagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 caccccatggactcaccagcagctcggttcttccctggtttgcaaagagtgacccagagt 437

                                                                       
Query: 61  tcaggacagatggttgcttacagtgcctgtgtatgtgtcctggccagcatggcaggcttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcaggacagatggttgcttacagtgcctgtgtatgtgtcctggccagcatggcaggcttg 377

                                                                       
Query: 121 ctcctcagcttaacccaagctctctttggcctgcatccctgtttttaggccctgactccc 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 376 ctcctcagcttaacccaagctctctttggcctgcatccctgtctttaggccctgactccc 317

                                                                       
Query: 181 gctatgactggattactgtc----tttttttttctgtccatatgtatggacaattttatg 236
           ||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||
Sbjct: 316 gctatgactggattattgtctttttttttttttctgtccatatgtatggacaattttatg 257

                                                                       
Query: 237 ttctcaaatcttcatgtcccttgaaacaatagtttgtttggattataaaacgtagctgct 296
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttcccaaatcttcatgtcccttgaaacaatagtttgtttggattataaaacgtagctgct 197

                                                                       
Query: 297 tggatttgagtgtgtgtgttccctactaaactcatatattggcatatatgtattaccaag 356
           ||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||
Sbjct: 196 tggatttgagtgtctgtgtcccctactaaactcatatattggcatatacatattaccaag 137

                                                                       
Query: 357 gggagattgtggtctttgagaaaaaatattttgaggtatggccttttcggcataatgggg 416
           ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 136 gggagattgtggtctttgagagaaaatattttgaggtatggctttttcggcataatgggg 77

                                                                       
Query: 417 tttgagttcctattggaaaaaaaatccccaaatctgctttgtcctttctgctatatgatg 476
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 76  tttgagttcctattggaaaaaaaatccccaaatctgctttgtcctttctgctatatgacg 17

                           
Query: 477 atgctgggaaagttcc 492
           ||||||| ||||||||
Sbjct: 16  atgctggaaaagttcc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1055
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1045
Effective search space:   669845
Effective search space used:   669845
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)