Query= MSMg01no486_i15.b1 MSMg01no486_i15.b1 CHROMAT_FILE:
MSMg01no486_i15.b1 PHD_FILE: MSMg01no486_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:52 2005
(523 letters)
>mm_chr2_32044383_32045305
Length = 923
Score = 891 bits (461), Expect = 0.0
Identities = 508/535 (94%), Gaps = 21/535 (3%)
Strand = Plus / Plus
Query: 1 tgtgtgtgcatatgtgtgcatgtgaaggtcagaggatggttttgcttgtcttccctcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtgtgcatatgtgtgcatgtgaaggtcagaggatggttttgcttgtcttccctcatg 260
Query: 61 aatggtacacctcattttttgcaacaagtcctctggcttgaagctcactgtcttaaatta 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatggtaaacctcattttttgcaacaagtcctctggcttgaagctcactgtcttaaatta 320
Query: 121 ctttctgttgctgtgacataacactgtgaccaaaagtaacttggagaggaaaagtttatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 ctttctgttgctgtgacataacactgtgaccaaaagtaacttggagaggaaacgtttatt 380
Query: 181 ttagctcacagcccatcatgagtagaaatctgtacaggaactccaggctggactcctatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagctcacagcccatcatgagtagaaatctgtacaggaactccaggctggactcctatc 440
Query: 241 tttttttttg--------aactgatggggaagtcacagagggatgctgcttactggctca 292
| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 t--------ggaggcaggaactgatggggaagtcacagagggatgctgcttactggctca 492
Query: 293 ctcccctggcgattcagtttgcttttttatatatgatctgcccagggagaacactgcctc 352
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctcccctggtgattcagtttgcttttttatatatgatctgcccagggagaacactgcctc 552
Query: 353 tggttggctgggccccaaacatcaatcagtaaccaagagaatgccccacagaggtgcct- 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tggttggctgggccccaaacatcaatcagtaaccaagagaatgccccacagaggtgcctg 612
Query: 412 tca----atggaggcatttcctaattacgacttcctcttctaagtataactgtatgtcat 467
| | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 613 taatcgtatggaggcatttcctaattacgacttcctcttctgagtataagtgtatgtcat 672
Query: 468 ggtgcttggtactggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 522
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ggtgcttggtactggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_i15.g1 MSMg01no486_i15.g1 CHROMAT_FILE:
MSMg01no486_i15.g1 PHD_FILE: MSMg01no486_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:52 2005
(474 letters)
>mm_chr2_32234247_32235120
Length = 874
Score = 870 bits (450), Expect = 0.0
Identities = 468/474 (98%)
Strand = Plus / Minus
Query: 1 gcaacagcttggggaggcccctggcgatgccagcccctaggtgccgggagcccccatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcaacagcttggggaggcccctggcgatgccagcccctaggtgccgggagcccccatcca 615
Query: 61 ggccctaccctcacctctctaggccatgttctggcctgggtagatactacttggcttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggccctaccctcacctctctaggccatgttctggcctgggtagatactacttggcttaga 555
Query: 121 caccatctcgggtactggcctccagatcctagtgggtctaccagcctggaccattcccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 554 caccatctcgggtactggcctccagatcctagtgggtctaccagcctggaccagtcccca 495
Query: 181 ttcactgcccatcacccttcctggagtcaggtgcaatcctacagttctcccacttgtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttcactgcccatcacccttcctggagtcaggtgcaatcctacagttctcccacttgtctg 435
Query: 241 ttttctttcccctccatccagactgagagtccgaattaaagatgtctcccacaccactgc 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tcttctttcccctccatccagactgagagtccgaattaaagatgtctcccacaccactgc 375
Query: 301 ccccttcttctttgtgcccagatgaggaccctagtagccaccggagggcagtggagcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ccccttcttctttgtgcccagatgaggaccctagtagccaccggagggcagtggagcaga 315
Query: 361 gaccatgacccatgggccatgtgatggggctctgagccacctttcatttccaagggcgtg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 314 gaccatgacccatgggccatgtgatggggctctgagccacctttcatttccaagggtgtg 255
Query: 421 ggtgaggtcaggcttcctctctggctggcgtgttgctctggcggctgcttccca 474
||||||||||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 254 ggtgaggtcaggcttcctccctggctggtgtgttgctctggcagctgcttccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
