Query= MSMg01no488_l07.b1 MSMg01no488_l07.b1 CHROMAT_FILE:
MSMg01no488_l07.b1 PHD_FILE: MSMg01no488_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:42 2005
(239 letters)
>mm_chr2_38717840_38718478
Length = 639
Score = 373 bits (193), Expect = e-108
Identities = 222/239 (92%), Gaps = 13/239 (5%)
Strand = Plus / Plus
Query: 1 ttagagaatctatgcttgggatagatggaataagtttatttcagatttctatttcacttg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ttagagaatctatgcttgggatagatggaataagtctatttcagatttctatttcacttg 260
Query: 61 ggcttttccacaaatccctggcattgtctcatactggttttgttttgaggttttttgttt 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcttttccacaaatccctggcattttctcatactggttttgttttgaggttttttgttt 320
Query: 121 ggtttgagggttttttgtttttgtttttgtttttatttatttatttatttatttgttgtt 180
|||||||||||||||||||||| ||||| |||||||||| || ||||||
Sbjct: 321 ggtttgagggttttttgtttttattttt----ttatttatttgtt---------gttgtt 367
Query: 181 gttgtttgtcttcttttgagtcagggtttctcagtgtaaccagtcctggctatttggga 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gttgtttgtcttcttttgagtcagggtttctcagtgtaaccagtcctggctatttggga 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no488_l07.g1 MSMg01no488_l07.g1 CHROMAT_FILE:
MSMg01no488_l07.g1 PHD_FILE: MSMg01no488_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:42 2005
(125 letters)
>mm_chr2_38819200_38819724
Length = 525
Score = 226 bits (117), Expect = 3e-64
Identities = 123/125 (98%)
Strand = Plus / Minus
Query: 1 aaggccatcctttgaggcatacaaagtttgagagcagcctgtgtcaaaaagaagttatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggccatcctttgaggcatacaaagtttgagagcagcctgtgtcaaaaagaagttatta 266
Query: 61 gagccgggcggtgacttggtgacttcttcagaaggcagaggcgggggtggaggggggtgg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 265 gagccgggcggtgacttggtgacttcttcaggaggcagaggcgggggtggaggggggcgg 206
Query: 121 gggtg 125
|||||
Sbjct: 205 gggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 125
Length of database: 525
Length adjustment: 8
Effective length of query: 117
Effective length of database: 517
Effective search space: 60489
Effective search space used: 60489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
