Query= MSMg01no489_m16.b1 MSMg01no489_m16.b1 CHROMAT_FILE:
MSMg01no489_m16.b1 PHD_FILE: MSMg01no489_m16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:10 2005
(490 letters)
>mm_chr2_33006617_33007510
Length = 894
Score = 913 bits (472), Expect = 0.0
Identities = 484/490 (98%), Gaps = 4/490 (0%)
Strand = Plus / Minus
Query: 5 gaattcatcacatatcctccccaaccctcttcccagacagacattgccaggtggttggaa 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gaattcatcacaaatcctccccaaccctcttcccagacagacattgccaggtggttggaa 635
Query: 65 gtggacagtgggggtgggcagtggtgagcagtagcaggcctcgagagagtgagtcccttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gtggacagtgggggtgggcagtggtgagcagtagcaggcctcgagagagtgagtcccttt 575
Query: 125 aatggaagagaggaaggggtggtacagctctctctacaatagtgggttgtcttctatctc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 574 aatggaagagaggaaggggtggtacagctctctctacaatagtgggttgtcttctatccc 515
Query: 185 tgcagggagttgggacacaagagttcacccaacacacagtggttgtccagtggagtaccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgcagggagttgggacacaagagttcacccaacacacagtggttgtccagtggagtaccc 455
Query: 245 tgtatcagctgcaggttcaggcagcttcttgagagttggtagttaacaggcatgaaaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgtatcagctgcaggttcaggcagcttcttgagagttggtagttaacaggcatgaaaaga 395
Query: 305 actctggtgagcctttgtgatggtcctggggcgtgaggatacaaagtagattctaggtca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 actctggtgagcctttgtgatggtcctggggcgtgaggatacaaagtagattctaggtca 335
Query: 365 tgacctggggttggaagggtggcctgcgaatgctcagagtttctgggggccttctacagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgacctggggttggaagggtggcctgcgaatgctcagagtttctgggggccttctacagg 275
Query: 425 agagggtt----ctccacattatgttctgctagcttgagaccaggaagtgtaatgtcaga 480
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 agagggttctccctccacattatgttctgctagcttgagaccaggaagtgtaatgtcaga 215
Query: 481 ggcctctgag 490
||||||||||
Sbjct: 214 ggcctctgag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 894
Length adjustment: 10
Effective length of query: 480
Effective length of database: 884
Effective search space: 424320
Effective search space used: 424320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_m16.g1 MSMg01no489_m16.g1 CHROMAT_FILE:
MSMg01no489_m16.g1 PHD_FILE: MSMg01no489_m16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:10 2005
(376 letters)
>mm_chr2_32826618_32827394
Length = 777
Score = 576 bits (298), Expect = e-169
Identities = 322/334 (96%), Gaps = 10/334 (2%)
Strand = Plus / Plus
Query: 1 acaaatgtatgcattattccctccccc---cacaaaagtaaaaagcagaaaataaaaatg 57
|||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 201 acaaatgtatgcatta-tccc-cccccacacacaaaagtaaaaagcagaaaataaaaatg 258
Query: 58 gcagccaatggctgggggacacagcgtggtgccgggcgtgtttggctagttagcacacgc 117
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 259 gcagccaatggctgggggacacagcgtggtgccgggagtgtttggctagttagcacacgc 318
Query: 118 tgggctctgagcccagttgccagtgatgggaagaaaaacacggcaggagaccaagcacat 177
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 319 tgggctctgagcccagttgccagtgatgggaagaaaaacacagcaggagaccaagcacat 378
Query: 178 gggagtggcagtaagagaacgcctttcccggctttgcggacagtcatctccctcacacct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gggagtggcagtaagagaacgcctttcccggctttgcggacagtcatctccctcacacct 438
Query: 238 ggactgagacaccgctacaatcctgaccggtgattgttctgtgaagatttcagcaaattt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggactgagacaccgctacaatcctgaccggtgattgttctgtgaagatttcagcaaattt 498
Query: 298 atttatcanatttatttatttatttatttattta 331
|||||| |||||||||||||||||||||||
Sbjct: 499 atttat-----ttatttatttatttatttattta 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 777
Length adjustment: 9
Effective length of query: 367
Effective length of database: 768
Effective search space: 281856
Effective search space used: 281856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
