NNNNAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCACCTGTACGAAACTGAATGGCTGAGAAGCACCTGAAAA
AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCATCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGA
CAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGATTGCAAGTTTGTACAACTACTCTGGAAATCAGTCTGGCAGTTC
CTCAGAAAATTGGACATAGTACTACCGGAGGATCCCGCAATACCTCTCCT
GGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCC
AGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACAC
AATGGAATGCTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAG
GCAAATGGTTGGACGTGGAGGGCATCATCCTGAGTGAGGTAACACAATCA
CAAAAGAACTCAAATGATATGTACTCACTGATAAGTGGATATTAGCCCAG
AAACTTAGTATATTCGAGATAAAAGATACAATTTGCAAAACACATGAAAC
TGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATT
GGGAAN

AATTTTCGATGATANTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGATTCATTTTTTTAGTTA
TTTTGAAAGTTATTTTTCTATTGAGGTCAAGAAATGTATATGTGGTACAC
ATTTTAAGATGCTTAGTTTTTCTAGAAGAAAATACTAACCATTCTTGTCA
AGGGATAGTTCTGTACCCAACAGCTATTGAAGCTGCTAGACTGACTATGT
GCACTGCTGGGTCTGCTGCCCCTGTAACACACATGAAAAACATTTATTTC
TCCTCATGGATAAGGAATTACATTGCTACCTGGGAATTGCAGTCTTCACT
TAGGGGATCTTGGACTCAATAAAATAAATAATGGATTTAAACAGAAGCTC
AAGAACAATTTTATTGAGTTTTAAAGAAAAACAAACAAATAAACAAAGCA
TATAGGCAAGCTATAAATCTTATCAATTTCCCAGAGGAGAAGAATGGAGG
AGAGAAAGAAAAAAAGGCACACAATTGGAGGTCAGGCACATGGTAGACAA
GCATCCACTTGATGGGTAGGGGATGCTTTGAGTAAGAGCAAGAAAGGTGA
AAGTAGCAGAAATAGCATTCTTGGGTTCTTGCCAGTATCCCAAAGTAAGA
GCAACAACCAGAACTAGAACAAAATAAAACAACCAAACAACCCAAAATTA
CATATAAAAACCAACAAACAAAGGAAAGAAAAAAGGGAAGAAGGAAAGAA
AGAACTAAG

Query= MSMg01no489_p19.g1 MSMg01no489_p19.g1 CHROMAT_FILE:
MSMg01no489_p19.g1 PHD_FILE: MSMg01no489_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:26 2005
         (547 letters)



>mm_chr2_132985489_132986435
          Length = 947

 Score = 1058 bits (547), Expect = 0.0
 Identities = 547/547 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgattcatttttttagttattttgaaagttatttttctattgaggtcaagaaatgtat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgattcatttttttagttattttgaaagttatttttctattgaggtcaagaaatgtat 260

                                                                       
Query: 61  atgtggtacacattttaagatgcttagtttttctagaagaaaatactaaccattcttgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtggtacacattttaagatgcttagtttttctagaagaaaatactaaccattcttgtc 320

                                                                       
Query: 121 aagggatagttctgtacccaacagctattgaagctgctagactgactatgtgcactgctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagggatagttctgtacccaacagctattgaagctgctagactgactatgtgcactgctg 380

                                                                       
Query: 181 ggtctgctgcccctgtaacacacatgaaaaacatttatttctcctcatggataaggaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtctgctgcccctgtaacacacatgaaaaacatttatttctcctcatggataaggaatt 440

                                                                       
Query: 241 acattgctacctgggaattgcagtcttcacttaggggatcttggactcaataaaataaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattgctacctgggaattgcagtcttcacttaggggatcttggactcaataaaataaat 500

                                                                       
Query: 301 aatggatttaaacagaagctcaagaacaattttattgagttttaaagaaaaacaaacaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatggatttaaacagaagctcaagaacaattttattgagttttaaagaaaaacaaacaaa 560

                                                                       
Query: 361 taaacaaagcatataggcaagctataaatcttatcaatttcccagaggagaagaatggag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaacaaagcatataggcaagctataaatcttatcaatttcccagaggagaagaatggag 620

                                                                       
Query: 421 gagagaaagaaaaaaaggcacacaattggaggtcaggcacatggtagacaagcatccact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagagaaagaaaaaaaggcacacaattggaggtcaggcacatggtagacaagcatccact 680

                                                                       
Query: 481 tgatgggtaggggatgctttgagtaagagcaagaaaggtgaaagtagcagaaatagcatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgatgggtaggggatgctttgagtaagagcaagaaaggtgaaagtagcagaaatagcatt 740

                  
Query: 541 cttgggt 547
           |||||||
Sbjct: 741 cttgggt 747


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)