Query= MSMg01no490_p10.b1 MSMg01no490_p10.b1 CHROMAT_FILE:
MSMg01no490_p10.b1 PHD_FILE: MSMg01no490_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:42 2005
(425 letters)
>mm_chr2_45338721_45339545
Length = 825
Score = 404 bits (209), Expect = e-117
Identities = 230/237 (97%)
Strand = Plus / Minus
Query: 189 cctgccgtaaagccatctaggtaaagtcacgcaacgaaacaacggggattatgagagaag 248
|||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 625 cctgccataatgccatctaggtaaagtcacgcaacgaaacaacagggattatgagagaag 566
Query: 249 tgatgttggaatataacactcaaaaacaaatgtattaaatattaaaaatttacacaacgt 308
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 565 tgatgttggaatataacactcaaaaccaaatgtattaaatattaaaaatttacacaatgt 506
Query: 309 actcaaatgtataaaattattttctactttgtcagactgtttggttcgtaatacctttat 368
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actcaaatgcataaaattattttctactttgtcagactgtttggttcgtaatacctttat 446
Query: 369 atgatgtagctattatggaaatgcattacatcataggcaacactggaaatttttgag 425
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 atgatgtagctattatggaaatgcattacatcataggcaacactgaaaatttttgag 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_p10.g1 MSMg01no490_p10.g1 CHROMAT_FILE:
MSMg01no490_p10.g1 PHD_FILE: MSMg01no490_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:42 2005
(659 letters)
>mm_chr2_45178747_45179804
Length = 1058
Score = 1205 bits (623), Expect = 0.0
Identities = 650/659 (98%), Gaps = 1/659 (0%)
Strand = Plus / Plus
Query: 1 tgaacacatttctatgtatgatgaatgaatttgggcctgacagtgttggatgttttaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaacacatttctatgtatgatgaatgaatttgggcctgacagtgttggatgttttaatc 260
Query: 61 ttaataaaaaaaaatgctttccccagggacctagttatgttccttaagtgccccaccccc 120
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaataaaagaaa-tgctttccccagggacctagttatgttccttaagtgccccaccccc 319
Query: 121 actgtacagaaagtgtttgtgactactgggctattagagaagacgggacctggttaccca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 320 actgtacagaaagtgtttgtgactactgggctattagagaagacaggacctggttaccca 379
Query: 181 ggaaagattggatacctgttttataaaggggatggaacctcttgtctctcagttagacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggaaagattggatacctgttttataaaggggatggaacctcttgtctctcagttagacta 439
Query: 241 ctaatttttatgcttcatgaacccctgtatctaactataattgttgaggggaaattatga 300
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 ctaattgggatgcttcatgaacccctgtatctaactataattgttgagggaaaattatga 499
Query: 301 atctccaataaagtcagtattcttaagaatataatcttaagaactactggtggaatcacc 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atctccaataaagtcagtagtcttaagaatataatcttaagaactactggtggaatcacc 559
Query: 361 atgcctgacctcaagctgtactacagagcaattgtgataaaaactacatggtactggtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgcctgacctcaagctgtactacagagcaattgtgataaaaactacatggtactggtac 619
Query: 421 agtgacagacaggtagatcaatggaatagaattgaagacccagaaatgaacccacacaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agtgacagacaggtagatcaatggaatagaattgaagacccagaaatgaacccacacaac 679
Query: 481 tatgggttcacttgatctttgacaaaatagctaaaaccatccagtggaaagaagacagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tatgggttcacttgatctttgacaaaatagctaaaaccatccagtggaaagaagacagca 739
Query: 541 tcttcaacaaatggtgcagggtcaattggcggttatcatgtagaagaatacaaattgatc 600
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 740 tcttcaacaaatggtgcagggtcaactggcggttatcatgtagaagaatacaaattgatc 799
Query: 601 cattcttatctcctgtacaaagctcaagtctaggtggatcaaggaactccatataaaac 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cattcttatctcctgtacaaagctcaagtctaggtggatcaaggaactccatataaaac 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1058
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1048
Effective search space: 680152
Effective search space used: 680152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
