XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTAT
AATTACTTATTATCCATTACATCCACAGACACCGAACCCCAACACTATTG
CTGATGCCAAGATATGTTTACAGACAGGAACCTGGTATGGCTGTCCTCTG
AGAGGCTCTGCCAGCACATGACTGACAGATGCAAATACTCACAACCAACC
ATTGGACTGAGCCCAGGGATCCCAATGGAAGAATTAGGGGAAGGGCTGAA
GGAGCTGAAGGGAATTGCCACCCCATAGGAAGAACAACAGTATGAATTAA
CCAGACCCTTCAGAGTTCCCAGGGACTGAAGCACCAGAGTATGCATGAGC
TGGTCCATGGCTCCAGCTACAGGAGATGACTGCCTCATCTGGCATCAGTG
GGAGGGGAGGCGCTTGGTCCTGTAGAGGCTTGATAGCCCACAGAAGCGGG
AGCCTAGAGGGATAGAGGGGTAGAGGGGTAAGGCAGGAGTGGAATGGGTA
GGTGGGGGANNNNNNTNTNNNANNNTNNNNGNNNGGGNGGGGTGGAGTTG
GTGTTTTGTTGTNGTGTTTTTTTGGTTGTTTTTTTTTTTTTTTTTGGGTT
GTTTTTTTTGTTTTTTGTTTTTTTTGTNTTGTTTTTTTGGTTTTTTTTGT
TGTTGTTTTGTGTTGTTGTTTTTTTTGTTGTTGTTTTTTATTGGTTTTTT
TTTGTTTTTTTTGGTTTGTTTGTGTTTGTTTTTTTTTTTGTTGTTTTTTT
TTTGTTTTGTTTTTTTTTGGTTTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCAGGCATTCTTTTGAGATAGCATGTCTAAACAAGT
GAGACTGCAGGTGTTCTGTATGTAAGGACAAAGAAAACCTTACCACTGGC
CTAAGCTACGATTAGCATGGCAGGTGAGAGTTAGTATTCAGAATGCTCAT
TGAAACTTTACTATGCTTTAGCATTTCAATGAATTGGGTTTACTGAATAG
CTTATATATGACATTTATAATAGGATGGGAACAATTATTGAGCACAAGGA
CATGCCCTAGGACAAATAACCAGATAATGGGTTATGAGAGATTATAAGTA
GTGAGATATCTTCATTGACAAAGTCCTGTAATTAAAACAAGAGACCTACT
TGAATTGAACATTGTATTTGGAGAAATAGTAAATCAGATAATCAATAAAG
GAGAACAAGATAAACTCTGTGAATTAAAATTGATATGACATTCTATTTTT
ATTTATACATTTTCATGCTAAAAGATTAAATATCAACTCAATTCATTTGT
CTAAACATTGTGTATAGGTTTCTTCTGTGAAGTCACTGTTTTATTCATAA
TTTTTGAACAAATAATAAGGATACATGAATGTGTTATTCATCCATGTGCA
TACTTTCCACATTATGTGTAGTTTTTAAAAAAAATTTTGAGATTATTTTT
AATATAACTTTCACATGAATATATGTGATGATCTATCATATTTTCTTTTT
AAATAGAATATGCCAAATCACCAGTTC

Query= MSMg01no491_a20.g1 MSMg01no491_a20.g1 CHROMAT_FILE:
MSMg01no491_a20.g1 PHD_FILE: MSMg01no491_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:50 2005
         (500 letters)



>mm_chr2_139237327_139238226
          Length = 900

 Score =  936 bits (484), Expect = 0.0
 Identities = 496/500 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggcattcttttgagatagcatgtctaaacaagtgagactgcaggtgttctgtatgtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 caggcattcttttgagatagcatgtctaaacaagtgagactgcaggtgttctgtatgtaa 641

                                                                       
Query: 61  ggacaaagaaaaccttaccactggcctaagctacgattagcatggcaggtgagagttagt 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 640 ggacaaagaaaaccttaccactggcctaagctactattagcatggcaggtgagagttagt 581

                                                                       
Query: 121 attcagaatgctcattgaaactttactatgctttagcatttcaatgaattgggtttactg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 attcagaatgctcattgaaactttactatgctttagcatttcaatgaattgggtttactg 521

                                                                       
Query: 181 aatagcttatatatgacatttataataggatgggaacaattattgagcacaaggacatgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aatagcttatatatgacatttataataggatgggaacaattattgagcacaaggacatgc 461

                                                                       
Query: 241 cctaggacaaataaccagataatgggttatgagagattataagtagtgagatatcttcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cctaggacaaataaccagataatgggttatgagagattataagtagtgagatatcttcat 401

                                                                       
Query: 301 tgacaaagtcctgtaattaaaacaagagacctacttgaattgaacattgtatttggagaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgacaaagtcctgtaattaaaacaagagacctacttgaattgaacattgtatttggagaa 341

                                                                       
Query: 361 atagtaaatcagataatcaataaaggagaacaagataaactctgtgaattaaaattgata 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 340 atagtaaatcagataatcaataaaggagaacaagataaactctgtgaattaaaattaata 281

                                                                       
Query: 421 tgacattctatttttatttatacattttcatgctaaaagattaaatatcaactcaattca 480
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgacattctattttaatttatacattttcatgctaaaagattaaatatcaactcaattca 221

                               
Query: 481 tttgtctaaacattgtgtat 500
            |||||||||||||||||||
Sbjct: 220 cttgtctaaacattgtgtat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space:   436100
Effective search space used:   436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)