Query= MSMg01no493_a20.b1 MSMg01no493_a20.b1 CHROMAT_FILE:
MSMg01no493_a20.b1 PHD_FILE: MSMg01no493_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:27 2005
(693 letters)
>mm_chr2_6206209_6207301
Length = 1093
Score = 1294 bits (669), Expect = 0.0
Identities = 684/689 (99%)
Strand = Plus / Plus
Query: 5 gaattcaggcctaaccaggtaggactcgatcatctaagcgtgtacaagaaagtatggata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggcctaaccaggtaggactcgatcatctaagcgtgtacaagaaagtatggata 264
Query: 65 attaattaagttagtttaatcttcggagaataggataacagtagcaccaggctggatcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attaattaagttagtttaatcttcggagaataggataacagtagcaccaggctggatcct 324
Query: 125 aaccgcattggaaaataaaattgctgaggtgtttttaagctgcaagcttgttttattctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaccgcattggaaaataaaattgctgaggtgtttttaagctgcaagcttgttttattctg 384
Query: 185 caggagcaaatggtaaaactcttaggtatgggccaaagaaatttaaacatgaacttcaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggagcaaatggtaaaactcttaggtatgggccaaagaaatttaaacatgaacttcaat 444
Query: 245 agatggttatggttatcatttcctttcccctggggagatcagagaatgctctttgatgtt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 agatggttatggttatcatttcctttcccctggggagatcagagaatgctctctgatgtt 504
Query: 305 tttctctaaggttgtctatgaatgcattcaatgaagcaggaaggcataggcactcaactg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttctctaaggttgtctatgaatgcattcaatgaagcaggaaggcataggcactcaactg 564
Query: 365 ttaagggggcttctgaccaggttctcttcctctctcgaatatgggttgattctccttgcc 424
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 ttaagggggcttctgaccaggttcccttcctctctcgaatatgggttgattctccttgcc 624
Query: 425 agggaggagaggagtagttaaaagtatgtgtgagatattgctgctgtcacagtgtttgta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agggaggagaggagtagttaaaagtatgtgtgagatattgctgctgtcacagtgtttgta 684
Query: 485 cctgctaggtagctgtttccaagatggccatcaatgagccttgcctggtggtgtttaatc 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 685 cctgctaggtagctgtttccaagatggccatcaatgagccttgcctggtggtgtttaacc 744
Query: 545 tcaagcaacccttcccatagtatgccagggttggctcatgtgaccaataggatacaacag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcaagcaacccttcccatagtatgccagggttggctcatgtgaccaataggatacaacag 804
Query: 605 aatcgaaagtgtgctatcttgagataagattctgaatgccatcatggcttctatcctccc 664
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aagcgaaagtgtgctatcttgagataagattctgaatgccatcatggcttctatcctccc 864
Query: 665 tctcagcctacttctttgtggaaagcctt 693
|||||||||||||||||||||||||||||
Sbjct: 865 tctcagcctacttctttgtggaaagcctt 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_a20.g1 MSMg01no493_a20.g1 CHROMAT_FILE:
MSMg01no493_a20.g1 PHD_FILE: MSMg01no493_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:27 2005
(606 letters)
>mm_chr2_6368023_6369024
Length = 1002
Score = 1122 bits (580), Expect = 0.0
Identities = 598/606 (98%), Gaps = 4/606 (0%)
Strand = Plus / Minus
Query: 1 ctttatatgagtgtagcgcaccctatcctgtcatatatccaaactcactcaggttctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctttatatgagtgtagcgcaccctatcctgtcatatatccaaactcactcaggttctggg 743
Query: 61 tttcttgttttgttttgctctgttgaaaagaacagcgcaaaacatcctttaacatgtatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tttcttgttttgttttgctctgttgaaaagaacagcgcaaaacatcctttaacatgtatg 683
Query: 121 gctggacctgatcatgtaatatgtagattctgattctggaaatgcccacattttagaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gctggacctgatcatgtaatatgtagattctgattctggaaatgcccacattttagaacg 623
Query: 181 ccactgttgccagccacttacatttcaggtctctgttggatggggatttggagcaggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ccactgttgccagccacttacatttcaggtctctgttggatggggatttggagcaggttt 563
Query: 241 ggtaaaagtgtttcgttttaggtccatctttgtgagcttctatactattggcccatttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ggtaaaagtgtttcgttttaggtccatctttgtgagcttctatactattggcccatttgc 503
Query: 301 acagggtattttgctcatttaaataggaaaaaaactccttaacagtcagtgacattagcc 360
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 acagggtattttgctcatttaaataggaaaaaaactccttaa----cagtgacattagcc 447
Query: 361 ccttccctagtgaaacatccacctgtctcactgagggcccatgctctagtcattgtcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccttccctagtgaaacatccacctgtctcactgagggcccatgctctagtcattgtcagg 387
Query: 421 aaaatctgtgacatcatgagcctgagtctagcaaggctgcgggaaacccgagactcccaa 480
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 386 aaaatctgtgacatcatgagcctgagtctagcaaggcttcgggaaacccgaggctcccaa 327
Query: 481 gcgtgctcctcaagcccagagccttgctaacttcatgccaacttcatgctactgtgcaga 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 326 gcgtgctcctcaagcccagagccttgttaacttcatgccaacttcatgctactgtgcaga 267
Query: 541 cttaatggcctctggatcactgtgccaacctgacaaacgcagagaaccaccgagactccg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 266 cttaatggcctctggatcactgtgccaacctgacaaacgcagagaaccaccgagactctg 207
Query: 601 tctcaa 606
||||||
Sbjct: 206 tctcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1002
Length adjustment: 10
Effective length of query: 596
Effective length of database: 992
Effective search space: 591232
Effective search space used: 591232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
