MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-493L04
Chromosome	2 (Build37)
Map Location	144,173,708 - 144,174,008
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2
Downstream gene	Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik, Slc24a3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668915 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC668916 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins pseudo : _no_value

name	Pcsk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18549 MGI:97512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bfsp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12075 MGI:101770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043799 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100043534 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins

name	Dstn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56431 MGI:1929270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rrbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81910 MGI:1932395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4930517K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:403171 MGI:2684961
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC627160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 2472 ESTs, 6 Proteins pseudo : _no_value

name	EG433481 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433481 MGI:3645019
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Snx5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69178 MGI:1916428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	8430406I07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74528 MGI:1921778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ovol2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107586 MGI:1338039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ppia-ps2_1789.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606731
definition	note : peptidylprolyl isomerase A pseudogene 2_1789.1 pseudo : _no_value

name	LOC635097 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs, 2 Proteins pseudo : _no_value

name	Csrp2bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228714 MGI:1917264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043552 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043552
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	6330439K17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241688 MGI:2139080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polr3f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70408 MGI:1924086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbbp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26450 MGI:1347074
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec23b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27054 MGI:1350925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm561 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228715 MGI:2685407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dtd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66044 MGI:1913294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700010M22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66328 MGI:1913578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc24a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94249 MGI:2137513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcsk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37360981 GeneID:18549 MGI:97512
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proprotein convertase subtilisin/kexin type 2 transcript_id : NM_008792.3

name	Bfsp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66792789 GeneID:12075 MGI:101770
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beaded filament structural protein in lens-CP94 transcript_id : NM_009751.2

name	LOC100043534 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250028 GeneID:100043534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : similar to ribosomal protein L35a transcript_id : XM_001480374.1

name	Dstn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9790218 GeneID:56431 MGI:1929270
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : destrin transcript_id : NM_019771.1

name	Rrbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486711 GeneID:81910 MGI:1932395
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosome binding protein 1 transcript_id : NM_024281.2

name	Rrbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486725 GeneID:81910 MGI:1932395
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosome binding protein 1 transcript_id : NM_133626.2

name	4930517K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113679810 GeneID:403171 MGI:2684961
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930517K23 gene transcript_id : NM_001044750.1

name	4930517K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402306 GeneID:403171 MGI:2684961
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930517K23 gene transcript_id : NM_207275.1

name	Snx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345042 GeneID:69178 MGI:1916428
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 5 transcript_id : NM_024225.3

name	8430406I07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358848 GeneID:74528 MGI:1921778
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8430406I07 gene transcript_id : NM_028984.3

name	Ovol2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130293 GeneID:107586 MGI:1338039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovo-like 2 (Drosophila) transcript_id : NM_026924.3

name	Ovol2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23308706 GeneID:107586 MGI:1338039
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovo-like 2 (Drosophila) transcript_id : NM_152947.1

name	Csrp2bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340880 GeneID:228714 MGI:1917264
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine and glycine-rich protein 2 binding protein transcript_id : NM_181417.2

name	6330439K17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378023 GeneID:241688 MGI:2139080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330439K17 gene transcript_id : NM_172859.2

name	Polr3f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887770 GeneID:70408 MGI:1924086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) III (DNA directed) polypeptide F transcript_id : NM_029763.3

name	Rbbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86439976 GeneID:26450 MGI:1347074
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoblastoma binding protein 9 transcript_id : NM_015754.2

name	Sec23b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130653 GeneID:27054 MGI:1350925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC23B (S. cerevisiae) transcript_id : NM_019787.3

name	Gm561 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802860 GeneID:228715 MGI:2685407
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 561, (NCBI) transcript_id : NM_001033297.2

name	Dtd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891717 GeneID:66044 MGI:1913294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) transcript_id : NM_025314.2

name	1700010M22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988384 GeneID:66328 MGI:1913578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700010M22 gene transcript_id : NM_025490.2

name	Slc24a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131150 GeneID:94249 MGI:2137513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 transcript_id : NM_053195.2

name	Pcsk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679229 CCDS:CCDS16810.1 GeneID:18549 MGI:97512
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004286 - proprotein convertase 2 activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0004289 - subtilase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016486 - peptide hormone processing [Evidence IMP]; GO:0006508 - proteolysis [Evidence IMP] codon_start : 1 note : prohormone convertase 2; proprotein convertase 2 product : proprotein convertase subtilisin/kexin type 2 protein_id : NP_032818.1

name	Bfsp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66792790 CCDS:CCDS16811.1 GeneID:12075 MGI:101770
definition	codon_start : 1 note : filensin product : beaded filament structural protein in lens-CP94 protein_id : NP_033881.2

name	LOC100043534 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250029 GeneID:100043534
definition	codon_start : 1 product : similar to ribosomal protein L35a protein_id : XP_001480424.1

name	Dstn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790219 CCDS:CCDS16812.1 GeneID:56431 MGI:1929270
definition	GO_component : GO:0030864 - cortical actin cytoskeleton [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0006928 - cell motility [Evidence IMP]; GO:0000910 - cytokinesis [Evidence IMP]; GO:0030836 - positive regulation of actin filament depolymerization [Evidence IMP] codon_start : 1 note : corneal disease 1 product : destrin protein_id : NP_062745.1

name	Rrbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486712 GeneID:81910 MGI:1932395
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : ribosome binding protein 1 isoform a protein_id : NP_077243.2

name	Rrbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19482168 GeneID:81910 MGI:1932395
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : ribosome binding protein 1 isoform b protein_id : NP_598329.1

name	4930517K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113679811 GeneID:403171 MGI:2684961
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens Chromosome 20 open reading frame 179 (C20orf179) product : barrier-to-autointegration factor-like protein_id : NP_001038215.1

name	4930517K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402307 CCDS:CCDS16813.1 GeneID:403171 MGI:2684961
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens Chromosome 20 open reading frame 179 (C20orf179) product : barrier-to-autointegration factor-like protein_id : NP_997158.1

name	Snx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18034769 CCDS:CCDS16815.1 GeneID:69178 MGI:1916428
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : snoRNA MBI-43 product : sorting nexin 5 protein_id : NP_077187.1

name	8430406I07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312780 CCDS:CCDS16816.1 GeneID:74528 MGI:1921778
definition	codon_start : 1 note : likely ortholog of H. sapiens chromosome 20 open reading frame 72 (C20orf72) product : hypothetical protein LOC74528 protein_id : NP_083260.1

name	Ovol2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23308705 CCDS:CCDS16817.1 GeneID:107586 MGI:1338039
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0048558 - embryonic gut morphogenesis [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0001842 - neural fold formation [Evidence IMP]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant A; zinc finger OVO2; zinc finger protein 339; MOVO-B zinc finger protein; MOVO-C zinc finger protein; OVO homolog-like 2 product : ovo-like 2 isoform A protein_id : NP_081200.2

name	Ovol2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23308707 CCDS:CCDS16818.1 GeneID:107586 MGI:1338039
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0048558 - embryonic gut morphogenesis [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0001842 - neural fold formation [Evidence IMP]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform B is encoded by transcript variant B; zinc finger OVO2; zinc finger protein 339; MOVO-B zinc finger protein; MOVO-C zinc finger protein; OVO homolog-like 2 product : ovo-like 2 isoform B protein_id : NP_694455.1

name	Csrp2bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088884 CCDS:CCDS16819.1 GeneID:228714 MGI:1917264
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0008080 - N-acetyltransferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : cysteine-rich protein 2 binding protein product : cysteine and glycine-rich protein 2 binding protein protein_id : NP_852082.1

name	6330439K17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378024 GeneID:241688 MGI:2139080
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens chromosome 20 open reading frame 12 (C20orf12) product : hypothetical protein LOC241688 protein_id : NP_766447.2

name	Polr3f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754160 CCDS:CCDS16820.1 GeneID:70408 MGI:1924086
definition	GO_component : GO:0005666 - DNA-directed RNA polymerase III complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence ISS] [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006359 - regulation of transcription from RNA polymerase III promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : polymerase (RNA) III (DNA directed) polypeptide F protein_id : NP_084039.2

name	Rbbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86439977 CCDS:CCDS16821.1 GeneID:26450 MGI:1347074
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : retinoblastoma-binding protein 9 product : retinoblastoma binding protein 9 protein_id : NP_056569.2

name	Sec23b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980969 CCDS:CCDS16822.1 GeneID:27054 MGI:1350925
definition	GO_component : GO:0030127 - COPII vesicle coat [Evidence IEA]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0048471 - perinuclear region [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SEC23B protein_id : NP_062761.2

name	Gm561 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701806 CCDS:CCDS16823.1 GeneID:228715 MGI:2685407
definition	codon_start : 1 product : hypothetical protein LOC228715 protein_id : NP_001028469.1

name	Dtd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384676 CCDS:CCDS16824.1 GeneID:66044 MGI:1913294
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA] GO_process : GO:0019478 - D-amino acid catabolism [Evidence IEA] codon_start : 1 product : D-tyrosyl-tRNA deacylase 1 protein_id : NP_079590.1

name	1700010M22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988385 GeneID:66328 MGI:1913578
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005498 - sterol carrier activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens chromosome 20 open reading frame 79 (C20orf79) product : hypothetical protein LOC66328 protein_id : NP_079766.3

name	Slc24a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956242 GeneID:94249 MGI:2137513
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0015297 - antiporter activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008273 - calcium, potassium:sodium antiporter activity [Evidence IDA] [Evidence ISS]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence TAS]; GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein_id : NP_444425.1

name	LOC668915 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668915
definition	number : 1 pseudo : _no_value

name	LOC100043799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043799
definition	number : 1 pseudo : _no_value

name	LOC100043552 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043552
definition	number : 1 pseudo : _no_value

name	LOC100043552 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043552
definition	number : 2 pseudo : _no_value

name	LOC100043552 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043552
definition	number : 3 pseudo : _no_value

name	LOC668916 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250027 GeneID:668916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins product : similar to Ac2-008 pseudo : _no_value transcript_id : XR_034659.1

name	LOC627160 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250179 GeneID:627160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 2472 ESTs, 6 Proteins product : similar to MGC27348 protein pseudo : _no_value transcript_id : XR_034961.1

name	EG433481 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250180 GeneID:433481 MGI:3645019
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG433481 transcript_id : XR_035472.1

name	LOC635097 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250030 GeneID:635097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs, 2 Proteins product : similar to nuclear domain 10 protein 52 like 1 pseudo : _no_value transcript_id : XR_034670.1

clone name	MSMg01-180C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481M04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-265H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-493L04.T7 (MSMg01no493_l04.b1)	MSMg01-493L04.TJ (MSMg01no493_l04.g1)
ACC	AG571154	AG571155
length	827	699
length of high quality (start - end)	305 (44 - 348)	---
definition	CHROMAT_FILE: MSMg01no493_l04.b1 PHD_FILE: MSMg01no493_l04.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:18:20 2005	CHROMAT_FILE: MSMg01no493_l04.g1 PHD_FILE: MSMg01no493_l04.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:18:20 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA TTCACTTTGTAGTCCAGGCTGGCCTAAAACTCAGAAATCCACCTGTCTCT GCCTCCCAAGTACTGGGATTAAAGGCGTGCGTCACCACCGCCCAGCTAGC CCCTCGTTCTAAATGAATAACAAGCATCGTGTATGAAGGGTTGAGGTGAT AAGTGTATTTCTCCAGTGTCTCTCTAGTGACCCATTTCAAAGGCATAGCC CTCCAATGCTTTTTAAAAGATTTTACCCACCAGGCAGTGGTGGCGCATGC TTTTAATCCCAACACTTGGGAGGCAGAGACAGGTGGATTTCTGAGTTTNA GGTTAGCCTGGTTTACTAAGTTGTTACCGCGTTTTATATACCAATATAAT TATTTTTTTTTTTTTTTTCCCCCCACTAGTTTTTTTATTTTTTTTTTTTT ACCATTTACGTTTTTTTGGTTTTATATGTCTATTTTTCACGCATACTGTT TGGGCTTTTTTTTCGCTATCTTTTGTTTTACTTTACACCTTTGATTCCTG TCTTTTGGTTGTTTTACACTGGCTTTTTTTTTACATGATCTTTTTTACTA ATTTTTCTATAGTACCCATAATATTTTACTATTGACTTTTTTGCTGTGAT ATTCATTGCCGACGTTTTTATTCTTGCTCCCTTTGTTTTAATTTGTCAGC TTCAAACCTTTGTTTTTTTTATCTCTCTTTCTATTCTTCTCTATATTATA ACCTCCTCAAACTCTAATTAATACGAAATTAGTTTATTGTGCTTTATGAT ATACCATTATACTTGTCACATTCTATN	CACGCCCGACGAAACGAGNNGGAAAAGAGATTCACAAAGGAACAAGAACA AACAGCAGGACCCCAGACGGCACCACAAAAACCGACAAAAAACCCCCAAA CCAGTAATCCAATAACATAAAACAAACCCCAACGAGGCAGACGCGCCGGG AACCGAAGTGACAACCACACAAAAAAGGCGGCGGAAGAACAACCATAACA GGGAGAGGGGAAGCGGGTAAGTAGGCGCATGAGTTAAAGGCGCGCGCAGG GAACAAGCGAAGGGAGGAAAAGAAAGAAGAAAGCAATATAAAAACACAAC ACCATTTAAAAAAGAAAGAANNNNNNNGGGGGGGNNNNNNNACTAGGATA TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXTTGTACGTTTCCTGCAAGCTGGAGACTAGAGA AGGCCAGCGGCACAGATCAATGGCACAGACCGGGATGCATTTAACCCTCG GGGGAAGGGAAAGTTCAAAGGGGAAAAAAAAAGGGGAATCCCGAAAAAGG CCTTAAGGGAAAAAAAAGGGGGGGAAAAGGGAAAAAAAGGGGGGGGGCCC CCCGGGGGGGCCCAAAAAAAGGGGGCGCGGGGGGGAAAAAATCCCCCGGG GGGCCCCCCCCCAAGGGGGCTTTTGGGGGTTAAAAGGGGGAGAAAAAAA
quality values	Open. Hide. 6 6 6 6 10 8 18 16 10 10 10 8 8 13 21 22 23 22 28 28 28 43 48 30 30 31 31 30 27 27 10 10 9 10 10 10 16 26 28 28 22 18 20 28 41 59 59 36 36 36 36 53 33 33 33 33 59 43 33 18 9 9 9 9 15 17 27 33 47 47 59 48 59 59 59 59 59 57 53 53 47 47 47 47 42 47 48 50 50 42 50 54 54 68 68 68 68 68 68 68 68 68 68 68 50 50 50 54 54 54 68 68 68 68 68 48 48 48 48 48 51 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 59 57 57 57 57 57 57 68 59 59 59 59 59 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 57 57 57 59 59 68 59 59 59 59 68 59 59 59 59 68 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 52 57 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 44 43 28 28 28 40 43 57 68 68 54 50 48 43 42 37 32 28 37 25 33 34 39 47 39 43 39 47 47 47 41 41 59 46 46 43 41 23 23 3 0 3 21 8 9 12 13 17 11 12 11 11 13 21 20 15 12 12 13 15 12 8 8 6 6 8 6 9 9 9 8 8 8 9 10 10 12 12 9 9 11 10 12 10 10 10 10 10 10 10 10 9 9 12 9 9 10 18 10 12 12 12 12 16 28 32 34 28 28 10 9 9 11 11 7 6 6 6 8 8 8 8 8 8 9 12 10 10 11 11 12 13 9 10 8 10 13 10 14 11 10 13 10 10 10 11 8 13 10 8 8 8 12 12 15 15 10 10 6 6 8 6 8 8 8 10 10 11 10 8 9 10 9 9 8 8 8 8 11 13 10 10 10 10 10 10 10 11 8 10 6 13 10 8 8 8 9 11 11 11 16 18 12 10 8 8 8 8 6 6 8 8 9 15 18 17 17 11 10 8 6 6 8 8 8 10 10 12 12 12 12 12 8 8 6 6 8 8 8 8 8 6 6 8 8 10 10 8 8 8 8 8 8 13 8 8 8 8 8 8 8 8 8 6 6 6 8 8 9 8 12 9 10 10 8 8 8 8 8 6 7 8 10 10 12 16 16 11 10 10 10 9 9 9 16 16 11 11 9 10 10 8 8 8 8 8 8 8 8 12 6 7 8 8 8 8 8 8 11 12 13 11 9 9 8 8 8 8 10 19 20 16 12 8 8 8 8 8 8 10 8 8 8 10 10 8 8 10 8 8 8 8 10 8 9 9 10 10 10 12 6 6 6 10 8 11 11 11 10 10 10 12 10 10 10 8 8 8 8 9 8 8 7 7 8 7 7 8 8 8 8 8 8 8 9 8 8 8 8 8 8 9 8 8 8 10 12 14 15 10 9 8 10 8 8 8 8 8 8 8 8 8 8 8 10 10 8 10 10 8 10 8 6 6 10 8 12 13 13 13 10 10 10 9 9 9 10 8 8 8 8 8 8 8 10 10 10 13 11 11 9 9 9 9 8 6 6 7 8 8 8 8 6 6 8 8 10 8 8 8 6 8 10 9 9 11 13 16 8 8 8 10 9 8 9 10 8 8 10 8 8 8 10 10 12 11 12 11 10 8 8 6 6 8 8 11 11 3 0	Open. Hide. 8 8 8 8 8 8 6 6 8 6 6 8 8 6 6 8 8 3 0 0 3 9 9 9 8 8 8 8 8 6 6 6 6 6 6 8 8 6 6 6 6 6 6 6 6 7 7 10 6 6 8 6 6 8 7 7 7 8 6 6 6 8 8 10 9 9 9 8 7 8 8 8 8 8 6 6 8 10 8 8 9 9 6 6 6 6 10 10 16 12 9 9 9 9 9 9 8 10 11 10 8 7 8 8 8 8 6 6 8 8 8 6 6 8 8 11 11 8 8 8 8 8 8 10 12 12 10 8 8 8 8 8 9 8 8 8 8 8 8 6 6 6 6 6 6 6 8 8 9 9 9 9 9 9 6 8 8 8 8 8 10 9 9 9 8 8 8 8 8 10 10 10 12 12 9 8 8 8 8 10 8 8 7 7 7 10 10 12 9 9 10 10 10 10 12 12 10 13 8 8 8 10 19 8 8 8 8 6 8 8 8 9 9 9 9 8 8 6 6 8 8 9 9 9 9 10 8 8 6 6 8 8 8 8 8 8 8 8 10 9 8 8 7 6 6 6 6 8 8 8 8 8 8 8 11 18 13 15 15 13 10 8 10 8 8 8 6 6 6 7 8 8 8 8 8 8 8 8 8 9 10 10 10 13 10 9 9 9 9 9 9 8 8 8 8 8 8 10 10 11 8 8 6 6 8 8 8 8 6 8 10 8 6 6 8 8 10 8 8 3 0 0 0 0 0 0 0 3 9 9 9 9 9 3 0 0 0 0 0 0 0 3 6 6 6 8 8 8 8 6 6 6 8 10 8 10 10 11 9 11 9 9 8 8 8 17 8 10 11 8 6 6 6 6 6 6 6 6 6 3 0 3 10 7 6 6 6 6 3 0 3 0 3 8 8 22 22 28 19 9 8 8 8 8 6 6 6 6 6 6 6 6 3 0 3 11 11 12 11 11 10 17 16 27 28 25 30 17 14 14 14 14 16 18 18 27 28 17 10 14 8 8 8 10 9 9 10 9 10 10 9 9 9 10 10 15 11 11 11 17 16 11 13 11 11 10 11 11 11 10 9 9 12 15 11 9 8 8 6 6 6 9 13 12 10 10 9 9 9 9 9 12 15 10 12 12 12 12 13 14 9 13 8 8 8 9 9 13 12 11 11 13 11 11 11 12 13 20 24 24 14 14 8 8 8 8 8 8 12 12 11 10 10 12 8 8 8 9 9 11 12 11 11 9 12 9 9 9 9 8 8 6 6 8 6 8 8 9 11 11 12 12 13 13 13 11 11 14 16 20 20 15 17 22 14 12 14 11 9 9 9 8 10 11 19 19 15 11 11 11 12 15 16 16 16 10 9 9 9 13 12 12 12 12 16 16 19 10 10 10 11 11 11 9 10 14 17 16 19 14 14 14 16 7 7 6 6 6 6 9 12 12 13 9 9 10 16 20 21 16 11 11 11 11 13 11 12 12 21 21 24 24 14 13 13 23 25 25 18 7 7 7 7 7 7 11 11 8 8 10 11 16 11 14 17 19 16 15 14 10 10 10 13 12 16 17 12 13 8 8 8 8 8 15 15 20 19 19 19

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no493_l04.b1 MSMg01no493_l04.b1 CHROMAT_FILE:
MSMg01no493_l04.b1 PHD_FILE: MSMg01no493_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:20 2005
         (305 letters)



>mm_chr2_144173505_144174209
          Length = 705

 Score =  545 bits (282), Expect = e-159
 Identities = 297/302 (98%), Gaps = 2/302 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactttgtagtccaggctggcctaaaactcagaaatccacctgtctctgcctcc 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactttgtagaccaggctggcctaaaactcagaaatccacctgtctctgcctcc 263

                                                                       
Query: 64  caagtactgggattaaaggcgtgcgtcaccaccgcccagctagcccctcgttctaaatga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caagtactgggattaaaggcgtgcgtcaccaccgcccagctagcccctcgttctaaatga 323

                                                                       
Query: 124 ataacaagcatcgtgtatgaagggttgaggtgataagtgtatttctccagtgtctctcta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataacaagcatcgtgtatgaagggttgaggtgataagtgtatttctccagtgtctctcta 383

                                                                       
Query: 184 gtgacccatttcaaaggcatagccctccaatgctttttaaaagattttaccc-accaggc 242
           |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 384 gtgacccatttcaaaggcatagccctccaatgctttttaaaagattttacccgac-aggc 442

                                                                       
Query: 243 agtggtggcgcatgcttttaatcccaacacttgggaggcagagacaggtggatttctgag 302
           ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 443 agtggtggcgcatgcttttaatcccaacacttgggaggcagaggcaggcggatttctgag 502

             
Query: 303 tt 304
           ||
Sbjct: 503 tt 504



 Score = 81.9 bits (42), Expect = 4e-20
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                       
Query: 244 gtggtggcgcatgcttttaatcccaacacttgggaggcagagacaggtggatttctgagt 303
           |||||| |||| || ||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 295 gtggtgacgcacgcctttaatcccagtacttgggaggcagagacaggtggatttctgagt 236

             
Query: 304 tt 305
           ||
Sbjct: 235 tt 234


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space:   206016
Effective search space used:   206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information