CGCTATACGACTCACTATAGTTCTNAAATCGCGCGGAATCACTTACTAGT
ACCGTATAATATTTGTTTCATTAGTTATATCAAAAGTTTAATCATCAAGT
ACAACATCAAAAGTATAATATTCAAAATCAAATATTCTGGGTATGTGTTC
ATGAGAACTACATTTGTATGTTTGAATATTTGAAAATTTGTAATTTTTCT
GTAAATCTAATATATAAACATTTATAACCTTATTTATATAGATTATTAAA
TATAAAATATTACATAAAATATAAATTTGTTATATAACATATTAGAGAAA
TTAATATGTTATATTTATATTATACATAATACATTATAAATTTTAATATA
TAATGCATTATGGAAATTAATATACAATGTTGTGTACTATTTAATTTTAT
TAAAATATTAATAAGTAACAATATAAAATAAAGTTTTAAAGTTTTAAAAG
GCATATATTGGTGAAAATAAAGGAAGCTTTGGGAAAATCTCAATAATCAT
TCGATGTAGAACACATATTGTTATCTTGTGGTAGATGCTTCTGGCTTACA
TGGTCTCATCCTGTGCCTTCCAAAGAAATATGGTAACAGCACAAATCATG
TATGTGGGTATTCTCAGTAAATTCTTTTAGCTCTATTTTTTTTCAGTTAT
GTGAAGCTATTTTAAAATAGAATTTATTTTAGTCCATTAATAACATCAAG
GATAAATGTAGTTTTTTCTTTTTATTAATTACTAGATTTTGTAGGTGTAT
TGATTGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTCCATTTAGTTCTATTGTCCAAGAGTAGAGAGAGGGAAGG
TATAGAGCCCACCTCCAGCATGAAGACAGGACATCAAATGAAGGAGGAGG
GCGCCATTTCACAGTAACAACTCTGACTCATAATTGTTCCTGTCTAAAGA
ATTACAGGGATGGAAATGGAGAGGAGCCTGAGGAAAATAAGGTCCAGCGA
CAGGCCCAAAGTGGAATCCAGCTCAAGGAGAGGTCCCAAGGCCTAACACT
ATTACTGAGGCTATGGGGCACTCACAAAAAGGGACCTAGCATGACCGCAC
TCTGGAAGACTCATCAAGCAGCTGAAAGAGTCAGATACAGATATTTGCAC
TCAATGGACAGAAGCAGCTGAACCCTGTTGTTGAATTAGGGAACACTGAA
AGAAGCTGAGGAGAAGGGAGATTCTGTAGGAGCACCAGCAGTCTCAATTA
ACCTGGGCCTCCAAGATCTCTCAAACACTGGACCACCAAACAGGCAGCAT
ACACCAGCTGATCTGAGGTCCTCAAGACACATACAGTAGAGGACTTCCAG
GTCTGTGTCCATTCAGAGATGATGCACCTAACCCTCAAGAGACTGGAGGC
CTCAGAGAGTTTAGAGGTCAGGTGGGTTGGGGGTGGGGATATCCACATGG
AGACACAGGGGTCGGGAGGAGGTATGGAATGTGGAACAGTTGGAGGGTGG
ACAGGG

Query= MSMg01no494_k24.b1 MSMg01no494_k24.b1 CHROMAT_FILE:
MSMg01no494_k24.b1 PHD_FILE: MSMg01no494_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:35 2005
         (637 letters)



>mm_chr2_137668338_137669372
          Length = 1035

 Score =  822 bits (425), Expect = 0.0
 Identities = 444/451 (98%), Gaps = 4/451 (0%)
 Strand = Plus / Minus

                                                                        
Query: 189  ataaaatattacata-aa-atataaatttgttatataacatattagagaaattaatatgt 246
            ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1035 ataaaatattacatataatatataaatttgttatataacatattagagaaattaatatat 976

                                                                        
Query: 247  tatatttatattatacataatacattataaattttaatatataatgcattatggaaatta 306
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 975  tatatttatattatacataatacattataaaatttaatatataatgcattatggaaatta 916

                                                                        
Query: 307  atatacaatgttgtgtactatttaattttattaaaatattaataagtaacaatataaaat 366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915  atatacaatgttgtgtactatttaattttattaaaatattaataagtaacaatataaaat 856

                                                                        
Query: 367  aaagttttaaagttttaaaaggcatatattggtgaaaataaaggaagctttgggaaaatc 426
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855  aaagttttaaagttttaaaaggcatatattggtgaaaataaaggaagctttgggaaaatc 796

                                                                        
Query: 427  tcaataatcattcgatgtagaacacatattgttatcttgtggtagatgcttctggcttac 486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795  tcaataatcattcgatgtagaacacatattgttatcttgtggtagatgcttctggcttac 736

                                                                        
Query: 487  atggtctcatcctgtgccttccaaagaaatatggtaacagcacaaatcatgtatgtgggt 546
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735  atggtctcatcctgtgccttccaaagaaatatggtaacagcacaaatcatgtatgtgggt 676

                                                                        
Query: 547  attctcagtaaattcttttagctctattttttttcagttatgtgaagctattttaaaata 606
            ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 675  attctcagtaaatgcttttagctctatttttt--cagttatgtgaagctattttaaaata 618

                                           
Query: 607  gaatttattttagtccattaataacatcaag 637
            |||||||||||||||||||||||||||||||
Sbjct: 617  gaatttattttagtccattaataacatcaag 587


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1035
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1025
Effective search space:   642675
Effective search space used:   642675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)