Query= MSMg01no495_f20.b1 MSMg01no495_f20.b1 CHROMAT_FILE:
MSMg01no495_f20.b1 PHD_FILE: MSMg01no495_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:26 2005
(464 letters)
>mm_chr2_38001768_38002631
Length = 864
Score = 882 bits (456), Expect = 0.0
Identities = 462/464 (99%)
Strand = Plus / Plus
Query: 1 gttagttaccacaacatgagaattgtattacagggtcacagcattagaaaagctgagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttagttaccacaacatgagaattgtattacagggtcacagcattagaaaagctgagaag 260
Query: 61 cactttcctaggaggtaaaaggacattgttaaccatactggttccatggtgaaccggcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactttcctaggaggtaaaaggacattgttaaccatactggttccatggtgaaccggcaa 320
Query: 121 tcacatgtgacagttgctaaatggccaagtgtctactaaaggcctttaaatcagaaaact 180
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 tcacatgtgacagttgctaagtggccaaatgtctactaaaggcctttaaatcagaaaact 380
Query: 181 tcttaaaatatacaacaaaactgtaagattctttttcaacacctagcattcacaaatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttaaaatatacaacaaaactgtaagattctttttcaacacctagcattcacaaatgtt 440
Query: 241 ttgtggctggacctatcataaaagcatttcctcctttccttcacaatccccaagtgaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtggctggacctatcataaaagcatttcctcctttccttcacaatccccaagtgaggt 500
Query: 301 ccatggcttttctaagccaacaattccacagtctatgaatttgtcaccgtctttccactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatggcttttctaagccaacaattccacagtctatgaatttgtcaccgtctttccactt 560
Query: 361 gagattcattctgtttgtaattacttctgaagcagcattagaggaggggaactgttttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagattcattctgtttgtaattacttctgaagcagcattagaggaggggaactgttttcc 620
Query: 421 taatgccccactcactactctgtcctattccattacttgtccaa 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taatgccccactcactactctgtcctattccattacttgtccaa 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_f20.g1 MSMg01no495_f20.g1 CHROMAT_FILE:
MSMg01no495_f20.g1 PHD_FILE: MSMg01no495_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:26 2005
(606 letters)
>mm_chr2_38146323_38147328
Length = 1006
Score = 1166 bits (603), Expect = 0.0
Identities = 606/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Minus
Query: 1 tagaactttgatgatagggaattgtcatcttagttctgcaattttcatttccactcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tagaactttgatgatagggaattgtcatcttagttctgcaattttcatttccactcttta 568
Query: 61 ctccatttctttacaggaaagagaaaccagtttctatttttgtttcagttactgttattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctccatttctttacaggaaagagaaaccagtttctatttttgtttcagttactgttattt 508
Query: 121 ctgatttttatcctttacagttgagttgagttgaaactgacagagtataaacagtaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctgatttttatcctttacagttgagttgagttgaaactgacagagtataaacagtaaagg 448
Query: 181 acggttagggattttggattcctgaacccaagtacagaactattatgtttatctctatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 acggttagggattttggattcctgaacccaagtacagaactattatgtttatctctatgt 388
Query: 241 gagcatgtgtccatatttatgtgtatgctggagcacatgtttttgtgtgtgtttgtgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gagcatgtgtccatatttatgtgtatgctggagcacatgtttttgtgtgtgtttgtgtgt 328
Query: 301 gtgtgtaggttaaagggaaacctcagatggcattcctcaggcaccatccaccttttcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtgtgtaggttaaagggaaacctcagatggcattcctcaggcaccatccaccttttcctt 268
Query: 361 gaggcaaggtctagaacttacatagctctagggaacagcctctttctgcctttccagtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaggcaaggtctagaacttacatagctctagggaacagcctctttctgcctttccagtac 208
Query: 421 tgggattacatgtacataactatgcccgactcccccc-gcccccctcctttaaacatgga 479
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 207 tgggattacatgtacataactatgcccgactcccccccgcccccctcctttaaacatgga 148
Query: 480 ttctggcaatcaaactcaggttctcatgcaaagagaactaattgaactctcttcacaatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ttctggcaatcaaactcaggttctcatgcaaagagaactaattgaactctcttcacaatc 88
Query: 540 cttattatgcttactattattaataactaacaaatgtgagggctagggatatactaggac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 cttattatgcttactattattaataactaacaaatgtgagggctagggatatactaggac 28
Query: 600 tagagtg 606
|||||||
Sbjct: 27 tagagtg 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
