Query= MSMg01no496_l01.b1 MSMg01no496_l01.b1 CHROMAT_FILE:
MSMg01no496_l01.b1 PHD_FILE: MSMg01no496_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:06 2005
(648 letters)
>mm_chr2_60815549_60816596
Length = 1048
Score = 1152 bits (596), Expect = 0.0
Identities = 635/648 (97%)
Strand = Plus / Minus
Query: 1 ttcatgttcttcttgttcttcatggtagatagttctagaaagtcactgcacacagattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ttcatgttcttcttgttcttcatggtagatagttctagaaagtcactgcacacagattag 789
Query: 61 tgagaactgagccctggctcctaaggcattaatgcatccctcaggctcagccttccctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tgagaactgagccctggctcctaaggcattaatgcatccctcaggctcagccttccctta 729
Query: 121 ataaattaattcacattcttattttctgtattatttaaagacactatatttaacatgtta 180
|||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 728 ataaattaattcacattcttgttttctgtattatttgaagacactatattttacatgtta 669
Query: 181 tttctttgaaaataattagatgcagcatttctttatgataatagattagtcaagaggaga 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tttctttgaaactaattagatgcagcatttctttatgataatagattagtcaagaggaga 609
Query: 241 ttaacattttcctgacccagccaaatgtgactgtaaatttctttggtggttagctccaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttaacattttcctgacccagccaaatgtgactgtaaatttctttggtggttagctccaca 549
Query: 301 acttattgtcccttgaaggaacaaattctgtcactttacccaacttcatcattcactaga 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 548 acttattgtcccttgaaggaacaaattccgtcactttacccaacttcatcattcactaga 489
Query: 361 gccacttgagtccctcttaccatggtctcttgggaacattggggaatttcctctttattt 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 488 gccacttgagtccctcttaccatggtctcttgggaacactggggaatttcctctttattt 429
Query: 421 ttccaaaaatgtaatagtattgatccattagcactgcacttgctgctgaccctgtataat 480
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 428 ttccaaaaatgtaatagtattgatccattagcactgcactcgctgctgaccctgtacaat 369
Query: 481 gcatgcttagataaagcttgtagcgtgtggattttctgcataccatacaattcagttttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 368 gcatgcttagataaagcttgtagcgtgtggattttctgcataccatacaatgcagttttc 309
Query: 541 ttgctgctaggatctcaaaacagcattttagcagtacacttggggtcattttgaatagta 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 308 ttgctgctaggatctcaaaacagcatgttagcagtacacttggggtcattttgaatagta 249
Query: 601 atgttgccaattaaaaaaacaaacatgaaaaacaaatgaaaatgtaag 648
||||||||||||||| |||||||||||||||||||| |||||| ||||
Sbjct: 248 atgttgccaattaaataaacaaacatgaaaaacaaaggaaaatataag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_l01.g1 MSMg01no496_l01.g1 CHROMAT_FILE:
MSMg01no496_l01.g1 PHD_FILE: MSMg01no496_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:06 2005
(610 letters)
>mm_chr2_60641578_60642586
Length = 1009
Score = 1156 bits (598), Expect = 0.0
Identities = 607/610 (99%), Gaps = 1/610 (0%)
Strand = Plus / Plus
Query: 1 caactggtaacattttctctatttaataaaagaaagaataaggatccaaaaatgagatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caactggtaacattttctctatttaataaaagaaagaataaggatccaaaaatgagatac 260
Query: 61 aagatatgaaaaatttaaactaggcaatcaagttcaaacagatttcctagggctttatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatatgaaaaatttaaactaggcaatcaagttcaaacagatttcctagggctttatgt 320
Query: 121 ttcatgctgacagttttcatggtttccagaaaactggtctaggacatgaaaatattaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatgctgacagttttcatggtttccagaaaactggtctaggacatgaaaatattaagc 380
Query: 181 acatataagggcatttcagtttccatttcatttgtttgagccacagctcagataaccgcc 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 acatataagggcatttcagtttccatttcatttgtttgagcca-agctcagataaccgcc 439
Query: 241 ccatctgcttgcgccatttggctgcaaggggtggcactcacacagcacagtgccgtaccc 300
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccatctgcttgtgccgtttggctgcaaggggtggcactcacacagcacagtgccgtaccc 499
Query: 301 agctagacaagaagccagagtttccggaaggcaagggaaccaacctcaggacctgaaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agctagacaagaagccagagtttccggaaggcaagggaaccaacctcaggacctgaaggt 559
Query: 361 cagatacaactgaagccctggtgcggaaggccagcatcatgatcacaggaaaagacaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagatacaactgaagccctggtgcggaaggccagcatcatgatcacaggaaaagacaagc 619
Query: 421 gtagcacgaaggaagagatcaaatcaggaacgcaactcaccaatattcatagcatgcccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtagcacgaaggaagagatcaaatcaggaacgcaactcaccaatattcatagcatgcccc 679
Query: 481 cgtgtgaccttcaccacacaagacctatgaaaaatgtataagatgccagatctactatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cgtgtgaccttcaccacacaagacctatgaaaaatgtataagatgccagatctactatga 739
Query: 541 agggagcaatcctttgagggataggaggaatttccgtataaactcaccttagtactaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agggagcaatcctttgagggataggaggaatttccgtataaactcaccttagtactaaat 799
Query: 601 aaaaatcctg 610
||||||||||
Sbjct: 800 aaaaatcctg 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1009
Length adjustment: 10
Effective length of query: 600
Effective length of database: 999
Effective search space: 599400
Effective search space used: 599400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
