Query= MSMg01no496_l02.b1 MSMg01no496_l02.b1 CHROMAT_FILE:
MSMg01no496_l02.b1 PHD_FILE: MSMg01no496_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:07 2005
(658 letters)
>mm_chr2_32234052_32235108
Length = 1057
Score = 1234 bits (638), Expect = 0.0
Identities = 653/658 (99%), Gaps = 1/658 (0%)
Strand = Plus / Minus
Query: 1 ggaggcccctggcgatgccagcccctaggtgccgggagcccccatccaggccctaccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 ggaggcccctggcgatgccagcccctaggtgccgggagcccccatccaggccctaccctc 798
Query: 61 acctctctaggccatgttctggcctgggtagatactacttggcttagacaccatctcggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 acctctctaggccatgttctggcctgggtagatactacttggcttagacaccatctcggg 738
Query: 121 tactggcctccagatcctagtgggtctaccagcctggaccagtccccattcactgcccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tactggcctccagatcctagtgggtctaccagcctggaccagtccccattcactgcccat 678
Query: 181 cacccttcctggagtcaggtgcaatcctacagttctcccacttgtctgtcttctttcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cacccttcctggagtcaggtgcaatcctacagttctcccacttgtctgtcttctttcccc 618
Query: 241 tccatccatactgagagtccgaattaaagatgtctcccacaccactgcccccttcttctt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tccatccagactgagagtccgaattaaagatgtctcccacaccactgcccccttcttctt 558
Query: 301 tgtgcccagatgaggaccctagtagccaccggagggcagtggagcagagaccatgaccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgtgcccagatgaggaccctagtagccaccggagggcagtggagcagagaccatgaccca 498
Query: 361 tgggccatgtgatggggctctgagccacctttcatttccaagggtgtgggtgaggtcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgggccatgtgatggggctctgagccacctttcatttccaagggtgtgggtgaggtcagg 438
Query: 421 cttcctctctggctggtgtgttgctctggcggctgcttcccagctgatgcaggcacactg 480
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 437 cttcctccctggctggtgtgttgctctggcagctgcttcccagctgatgcaggcacactg 378
Query: 481 tgtgactgagatacagtcagactccctgggcactagggcctttcgccaccataacccccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 377 tgtgactgagatacagtcagactccctgggcactagggcctttcgccaccataaccctcc 318
Query: 541 cccccccaggatttgatggtaaacctcagtgctttcctcacccagctggcactggcagag 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cccccc-aggatttgatggtaaacctcagtgctttcctcacccagctggcactggcagag 259
Query: 601 ccaggctgtctttacctccagcagggctaaggatggcccctcactgctgctgtctctg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ccaggctgtctttacctccagcagggctaaggatggcccctcactgctgctgtctctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1057
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1047
Effective search space: 678456
Effective search space used: 678456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_l02.g1 MSMg01no496_l02.g1 CHROMAT_FILE:
MSMg01no496_l02.g1 PHD_FILE: MSMg01no496_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:07 2005
(610 letters)
>mm_chr2_32176107_32177116
Length = 1010
Score = 1145 bits (592), Expect = 0.0
Identities = 598/600 (99%)
Strand = Plus / Plus
Query: 11 ggaaagcaaaggtcagctcgagatagagtgccttctatctgccagagatgtagggaccag 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ggaaagcaaaggtcagctcgagatagagtgccttctatctgccagagatgtagggaccag 270
Query: 71 ggattggccacttaatagagggtgagttccccgtcgctaacagtatgcaagcagagtttg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ggattggccacttaatagagggtgagttccccgtcgctaacagtatgcaagcagagtttg 330
Query: 131 gcagatgtaagggtaagggaactccaagcatcgtttgagggtcccaaacgcctgttccta 190
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gcggatgtaagggtaagggaactccaagcatcgtttgagggtcccaaacgcctgttccta 390
Query: 191 accctagcaacctgtacttgctgcggttgcccctcttccctgttgcctggtgtgtgccta 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 accctagcaacctgtacttgctgcggttgcccctcttccctgttgcctggtgtgtgccta 450
Query: 251 cttgccctctggtatccattccgacttacacggtgagcagctctccctgccccccacgcc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cttgccctctggtatccattccgacttacacggtgagcagctctccctgccccccacgcc 510
Query: 311 aatcagaagcaagtaatgatctctgatcagtctttcatgtttgcttctgtaacagagact 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aatcagaagcaagtaatgatctctgatcagtctttcatgtttgcttctgtaacagagact 570
Query: 371 gcaattttaattttctctctctctctctctctctctctctctctctctctctctccctct 430
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gcaattttaattctctctctctctctctctctctctctctctctctctctctctccctct 630
Query: 431 ctctctcccccctcccaccctctccagaaagaacgatattacctacttatacaacctttc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctctctcccccctcccaccctctccagaaagaacgatattacctacttatacaacctttc 690
Query: 491 ctgttaatgcatccatcacccagtgcccctcatcactttgtagagtgctggtcagtcagt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ctgttaatgcatccatcacccagtgcccctcatcactttgtagagtgctggtcagtcagt 750
Query: 551 aagtgatggatggatgcttgtggtgacatgaatacatgaacactgagctgttacagttct 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aagtgatggatggatgcttgtggtgacatgaatacatgaacactgagctgttacagttct 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 109
Number of extensions: 39
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
