Query= MSMg01no496_l03.b1 MSMg01no496_l03.b1 CHROMAT_FILE:
MSMg01no496_l03.b1 PHD_FILE: MSMg01no496_l03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:07 2005
(550 letters)
>mm_chr2_67555209_67556160
Length = 952
Score = 1007 bits (521), Expect = 0.0
Identities = 544/555 (98%), Gaps = 8/555 (1%)
Strand = Plus / Minus
Query: 1 ccttataattattaatattccttcttcctcaccgatgctaatgatggtaatttatacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ccttataattattaatattccttcttcctcaccgatgctaatgatggtaatttatacaac 693
Query: 61 gtttgaatatcgaggagttttcatctcttcttttgctttcagaggccccattcaatttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtttgaatatcgaggagttttcatctcttcttttgctttcagaggccccattcaatttac 633
Query: 121 taggttttgagatactagtaccttgtttgctagtcaaagatagatgtagtgggttcttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 taggttttgagatactagtaccttgtttgctagtcaaagatagatgtagtgggttcttgc 573
Query: 181 aaggcagaaaatgatttaattatgtaaagaccaagtggcagagaatcagattatcctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaggcagaaaatgatttaattatgtaaagaccaagtggcagagaatcagattatcctctt 513
Query: 241 tttatttt----aatctcgtgcagtcctgagaaatgacaagggccccgaatggttttatt 296
|| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ttaa---tagacaatctcgtgcagtcctgagaaatgacaagggccccgaatggttttatt 456
Query: 297 acatttgttcctttagctcaggaagtttgagtcagtagtaaggagcatggggaataaatg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 acatttgttcctttagctcaggaagtttgagtcagtagtaaggagcatggggaataaatg 396
Query: 357 tcctatactactgactttccaatttcatcgtgcaggccaatcatttgtctgagctatccc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tcctatactactgactttccaatttcatcgtgcaggccaatcatttgtctgagctatccc 336
Query: 417 aaaccagttcttgacagcaggtgctaaattctcagccatgctctgaaagactcatcaatg 476
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 335 aaaccagttcttgacagcaggtgctaaattctcagccatgctctgagagactcattaatg 276
Query: 477 atagccaattttgaacactaaaccactcaattttaaaatgaattttttt-gaaaataggc 535
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 275 atagccaattttgaacactaaaccactcaattttaaaatgaattttttttgaaaataggc 216
Query: 536 aactaaaacagcata 550
|||||||||||||||
Sbjct: 215 aactaaaacagcata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 952
Length adjustment: 10
Effective length of query: 540
Effective length of database: 942
Effective search space: 508680
Effective search space used: 508680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_l03.g1 MSMg01no496_l03.g1 CHROMAT_FILE:
MSMg01no496_l03.g1 PHD_FILE: MSMg01no496_l03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:07 2005
(240 letters)
>mm_chr2_67409783_67410422
Length = 640
Score = 400 bits (207), Expect = e-116
Identities = 213/215 (99%)
Strand = Plus / Plus
Query: 1 tcattagcttatcctttgacggccggtgttttcctggcatgtataaatgacccaaaggtt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tcattagcttatcctttgacggccggtgtttccctggcatgtataaatgacccaaaggtt 260
Query: 61 gactcagttcctcatgaacctagcctttcaggcaacttcccctctgccctagactcagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactcagttcctcatgaacctagcctttcaggcaacttcccctctgccctagactcagta 320
Query: 121 aggacaaataccagaggcggagtttcttcctatgcagtcatgtgtaagtttcagtagaat 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 aggacaaataccagaggcggagtttcttactatgcagtcatgtgtaagtttcagtagaat 380
Query: 181 tagacagaaaagaacatgctatgtatatatatata 215
|||||||||||||||||||||||||||||||||||
Sbjct: 381 tagacagaaaagaacatgctatgtatatatatata 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
