NNAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAAGGCTCTCCCCTAAACATAGTAAAAGCAATATACAGCAAA
CCAGTAGCCAACATCAAACTAAATAGAGAGAAACTTGAAGCAATCCCACT
AAATCAAGGACTGGACAAGGTTGCCTGCTCTCTCCCTATTTGTTCAATAT
TGTATTCAAAGTTCTAGCTAGAGCAATTAAACAACAAAAGGATGTCAAAG
AGATACAAATTGGAAAGGAAGAAGTCAAAATATCACTATTTGCAGATGAC
ATGATCATATACTTAAGTGACCTTTTTTATTCCACTAGAGAATTCCTAAG
GCTGATAAACAACTTCAGCAATGTAGCTGGATATAAAATCATCTCAAACA
AATTATCTGCTCAAAGGACTAACATGCTGAGAAAGAAATTAGGAAAACAA
CAGCCTTCTCAATAGTCACAAATAATATTACACACCTTGGTGTGACTCTA
ACCAAGCAATTGAAAGTTCTGTATGACAAGGACTTCAAGTCTCTGAAGAA
AGAAATCGAAAAAGACCTCAGAAGACAGAACGATCTCCCATATTCATGGT
TTGGCAGGATTAGTATAGTAAAGATGACCATCCTCCCAAAAGCAATCTAC
AGATTCAATGCAATCCCCATCAAAATTCTAATTCAATTCTTCATAGAGTT
AGAAAGAGCAATTTGAAAATTCATTTGGAATAACAAAAAACCCGGGATAG

NATCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTCCTACCAGTAATTTATTT
CACTGATAGCAGGAAAATATTTTTCAAATTTATAAACTAAATATTCCAAA
ATATAAAATTGAAAAGAAACAAGATATTTTCTCAGCATAGTTGCAATTGG
AAAAAGGTCACACTCATGAATTTGATGCAGTGAAACAAAAGGGTTTAGAA
GGTTCCAGAAGTTTGTACTATATGACAAGACATCATCTATATTTGCTAAT
CATGTTTCTCTAAAGTCAATATATTCTTTTCTCTTCATGGATAGTTCCTT
TGTCTTACAAATTATATGGAAGATATTCTTGTTATAGACCACCAAGAAAC
TTATAAAAGATTCATATCTTAAAGAGAAAGAGAGAAAATGCACTATCATG
AGTCTTTTTAAAACAAATATCCTCAATAAATGCTCTTGGTATACTGTTGT
GCAGCAGTCCCCTTAGAGATTAAAACCTCCCATTTTAAAATAATTAAGAA
TAAATGAGCCCTTCCGCTCGACTCGAGCCCCGGGCTTCCTTGCCAGCAGA
GTCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGATCCT
AAGACCTCTGGTGAGTGGAACACATCGCCTGCCCCAATCCAATCGCGCGG
AACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGG
G

Query= MSMg01no497_d14.g1 MSMg01no497_d14.g1 CHROMAT_FILE:
MSMg01no497_d14.g1 PHD_FILE: MSMg01no497_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:50 2005
         (586 letters)



>mm_chr2_82434920_82435906
          Length = 987

 Score =  893 bits (462), Expect = 0.0
 Identities = 477/482 (98%), Gaps = 1/482 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgtcctaccagtaatttatttcactgatagcaggaaaatatttttcaaatttataaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttgtcctaccagtaatttatttcactgatagcaggaaaatatttttcaaatttataaac 623

                                                                       
Query: 61  taaatattccaaaatataaaattgaaaagaaacaagatattttctcagcatagttgcaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 taaatattccaaaatataaaattgaaaagaaacaagatattttctcagcatagttgcaat 563

                                                                       
Query: 121 tggaaaaaggtcacactcatgaatttgatgcag-tgaaacaaaagggtttagaaggttcc 179
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 562 tggaaaaaggtcacactcatgaatttgatgcagttgaaacaaaagggtttagaaggttcc 503

                                                                       
Query: 180 agaagtttgtactatatgacaagacatcatctatatttgctaatcatgtttctctaaagt 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 502 agaagtttgtactatatgacaagacatcatctatatttgctaatcatgtttctcgaaagt 443

                                                                       
Query: 240 caatatattcttttctcttcatggatagttcctttgtcttacaaattatatggaagatat 299
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caatataggcttttctcttcatggatagttcctttgtcttacaaattatatggaagatat 383

                                                                       
Query: 300 tcttgttatagaccaccaagaaacttataaaagattcatatcttaaagagaaagagagaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 382 tcttgttatagaccaccaagaaacttataaaagattcatatcttaaagagaaagagagac 323

                                                                       
Query: 360 aatgcactatcatgagtctttttaaaacaaatatcctcaataaatgctcttggtatactg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aatgcactatcatgagtctttttaaaacaaatatcctcaataaatgctcttggtatactg 263

                                                                       
Query: 420 ttgtgcagcagtccccttagagattaaaacctcccattttaaaataattaagaataaatg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttgtgcagcagtccccttagagattaaaacctcccattttaaaataattaagaataaatg 203

             
Query: 480 ag 481
           ||
Sbjct: 202 ag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 987
Length adjustment: 10
Effective length of query: 576
Effective length of database: 977
Effective search space:   562752
Effective search space used:   562752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)