Query= MSMg01no501_g05.b1 MSMg01no501_g05.b1 CHROMAT_FILE:
MSMg01no501_g05.b1 PHD_FILE: MSMg01no501_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:13 2005
(407 letters)
>mm_chr2_43470959_43471765
Length = 807
Score = 748 bits (387), Expect = 0.0
Identities = 399/403 (99%)
Strand = Plus / Plus
Query: 1 tgtctttattcaggagctaaaacaggatagagtagttataaaattgcacatcagttattt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tgtctttattcaggagctaaaacaggatagagtagttataaaattgcacagaagttattt 260
Query: 61 gaaaataagggtgtatagaaaatcccccaagaattactttaatggatgagtatctctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaataagggtgtatagaaaatcccccaagaattactttaatggatgagtatctctgga 320
Query: 121 aaattatgcaccttacaagtgagagcagagtaatagctgctacttctggtaatatcctat 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 aaattatgcaccttacaagtgagagcagagtaatagctgctacttccggtaatatcctat 380
Query: 181 gatttggatgcttgctatccagtacattttctcagaaaacccattagtgacctttcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatttggatgcttgctatccagtacattttctcagaaaacccattagtgacctttcatca 440
Query: 241 ggactcagatgagagaactgtttctgcaaaagcacttgccctgcccacttaagcagataa 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggctcagatgagagaactgtttctgcaaaagcacttgccctgcccacttaagcagataa 500
Query: 301 tgaagactggtgttggagtctacttacagatgattccaaagctatgttttcaatggctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaagactggtgttggagtctacttacagatgattccaaagctatgttttcaatggctgg 560
Query: 361 tatggacaatctcttttcactagactatctctttttattcatt 403
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatggacaatctcttttcactagactatctctttttattcatt 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_g05.g1 MSMg01no501_g05.g1 CHROMAT_FILE:
MSMg01no501_g05.g1 PHD_FILE: MSMg01no501_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:13 2005
(405 letters)
>mm_chr2_43523323_43524130
Length = 808
Score = 704 bits (364), Expect = 0.0
Identities = 399/418 (95%), Gaps = 13/418 (3%)
Strand = Plus / Minus
Query: 1 caaagaagacacagcagaggctgcatgggaagacaggaatcctgcgacagggacgtgtca 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 697 caaagaagacacagcagaggctgcatgggaagacagcaatcctgcgacagggacgtgtca 638
Query: 61 ctgacttttataggtctataaaaaa-----------aattgtgcaaaaat--aaaaaaaa 107
|||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 637 ctgactttcctaggtctataaaaaaaaccaaaaaacaattgtgcaaaaataaaaaaaaaa 578
Query: 108 ttacagaagtcaatctcaccaacacaatataatgatggattctgagataattatcataga 167
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 577 ttacagaagtcaatctcaccaacacaatataatgatggattttgagataattatcataga 518
Query: 168 tttcaaaaatctgtgaagatattcattatcacaaaactgggatagtgtcaaaacgtatat 227
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 517 tttcaaaaatctgtgaagatattcattatcacaaaactgggttagtgtcaaagcgtatat 458
Query: 228 cttctatgatctaataaaaccagcagttaatagaaaagccagaaaggataaggttgttac 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cttctatgatctaataaaaccagcagttaatagaaaagccagaaaggataaggttgttac 398
Query: 288 taccaagcaagagagaagaaaagttatatcaattacattcagaagaaagagggaaataaa 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 taccaagcaagagagaagaaaagttatatcaattacattcagaagaaagagggaaataaa 338
Query: 348 ttgaattgagagtttcctgggcacactgcttaactaccatgcagaaaataaaacagca 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttgaattgagagtttcctgggcacactgcttaactaccatgcagaaaataaaacagca 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 808
Length adjustment: 9
Effective length of query: 396
Effective length of database: 799
Effective search space: 316404
Effective search space used: 316404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
