ATCACTATAGTCAGAGGATCCGCGGAATTCCACCACTGATCTTCACACTC
TGGCTTCTCTTTTCAGTCTGCTTTCATTTGCTCATCCACAGTGAGAGCCC
TGACAAGGAGTGGCAATGAGTGCCCTGAAGGCAAAATTCCACTCTTCACC
TGTTACGAAAGAGGGTCCTAGATGTGACATTAGAGAAGAGGCTAATTACC
GCCCCCCCCCCACTTGACAATCAGCAGTGTTAACTGATGTTGAAAGAATT
CCCATGGGTAAGTGTGGGGGAGAGTCAGAACTAATGGCTTAAACTTATTG
CAGTGATGTTTTCAGTAAATAATTGCTGCTGCAGTCCAGATGTTTTCATT
GAGAAGTTGTGGTACCTCCGAACCTGCTAATCACCTGCAGAACACTAATG
GATACTTACAAATTCCATTTCTAGAAAATCCTTTCGTATATATTTAAAAA
GAGAAAAAAAGAAAAGCAAGTAAGAATAGGCTAAACGTAAAGTGCTCTTT
CTAGCTGGGTGAATGGCAGCCTGGGTCCTTTGTTTAGTGAGTGGAGGGGT
GGTTGCTCCTGTCTGCTGCGGTGGTGCAGGCACCATGCCTGGCAGGTCAG
GATGGGACGGGAGTGCGCGAAAACCTGATCTTTGCAGGGCCCTCGGGCTA
AAGAACCTGGGTAGATATTATTAAAGAACTGTGAA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTTTGTTTAGCTCTGAGCCCCATTTTTAATAGGGTTATTAGGT
TTTCTGGAGTTCAACTTCTTCAATTCTTTATATATATTGGATATTAGCTC
CCTATTGGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGTGGCC
TTTTTGTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAAGTTT
ATGAGGTCCCATTTGTCGATTCTTGATCTTACAACACAAGCCATTGCTGT
TCTGTTCATGATATTTTCCCCTCTGCCCATATCTTCGAGGTTCTTCCCCA
CTTTCTTCTCTATAAGTTTCAGTGTTTCTGGTTTTATGTGGAGTTCCTTG
ATCCACTTAGACTTGAGATTTGTACAAAGAAATAAGAATGGATCTATTGG
CATTCTTCTACATGATAACCGCCAGTTGAGCCAGTATCATTTGTTGAAAA
TGCTTTCTTCTTTCTTAATAAGGATTCAACCTCCGCTCTAGCACACTACC
CATCAGAGGTAGTGGAAAAGAAAGGTTATTAGAAATCAGAGGAAGTGGAC
CTGTTTAGAAATAGTTTTTTGGGGTGATTCCAGTCTTCGTTGTTCTCAGT
ACAGTCCACTAGCAAACACCCAACATGGATCAACAGCTGCAGTCCTGTTC
ACTGGGCAGACCCCAT

Query= MSMg01no501_l24.b1 MSMg01no501_l24.b1 CHROMAT_FILE:
MSMg01no501_l24.b1 PHD_FILE: MSMg01no501_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:38 2005
         (549 letters)



>mm_chr2_50844099_50845047
          Length = 949

 Score = 1040 bits (538), Expect = 0.0
 Identities = 544/546 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattccaccactgatcttcacactctggcttctcttttcagtctgctttcatttgctca 63
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gaattccaccactgagcatcacactctggcttctcttttcagtctgctttcatttgctca 690

                                                                       
Query: 64  tccacagtgagagccctgacaaggagtggcaatgagtgccctgaaggcaaaattccactc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tccacagtgagagccctgacaaggagtggcaatgagtgccctgaaggcaaaattccactc 630

                                                                       
Query: 124 ttcacctgttacgaaagagggtcctagatgtgacattagagaagaggctaattaccgccc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttcacctgttacgaaagagggtcctagatgtgacattagagaagaggctaattaccgccc 570

                                                                       
Query: 184 cccccccacttgacaatcagcagtgttaactgatgttgaaagaattcccatgggtaagtg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cccccccacttgacaatcagcagtgttaactgatgttgaaagaattcccatgggtaagtg 510

                                                                       
Query: 244 tgggggagagtcagaactaatggcttaaacttattgcagtgatgttttcagtaaataatt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tgggggagagtcagaactaatggcttaaacttattgcagtgatgttttcagtaaataatt 450

                                                                       
Query: 304 gctgctgcagtccagatgttttcattgagaagttgtggtacctccgaacctgctaatcac 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gctgctgcagtccagatgttttcattgagaagttgtggtacctccgaacctgctaatcac 390

                                                                       
Query: 364 ctgcagaacactaatggatacttacaaattccatttctagaaaatcctttcgtatatatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctgcagaacactaatggatacttacaaattccatttctagaaaatcctttcgtatatatt 330

                                                                       
Query: 424 taaaaagagaaaaaaagaaaagcaagtaagaataggctaaacgtaaagtgctctttctag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 taaaaagagaaaaaaagaaaagcaagtaagaataggctaaacgtaaagtgctctttctag 270

                                                                       
Query: 484 ctgggtgaatggcagcctgggtcctttgtttagtgagtggaggggtggttgctcctgtct 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctgggtgaatggcagcctgggtcctttgtttagtgagtggaggggtggttgctcctgtct 210

                 
Query: 544 gctgcg 549
           ||||||
Sbjct: 209 gctgcg 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space:   506121
Effective search space used:   506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)