Query= MSMg01no502_l04.b1 MSMg01no502_l04.b1 CHROMAT_FILE:
MSMg01no502_l04.b1 PHD_FILE: MSMg01no502_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:48 2005
(388 letters)
>mm_chr2_100451762_100452549
Length = 788
Score = 719 bits (372), Expect = 0.0
Identities = 384/388 (98%)
Strand = Plus / Minus
Query: 1 ttcttaaaggagataaattagagtgagtttagggctgaaacagaaatagacaatagtaaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 588 ttcttaaaggagataaattagagtgagcttagggctgaaacagaaatagacaatagtaaa 529
Query: 61 tcaacaagaagtttagatggaaaatcttgaattctttccatatgttgaaataaatacttt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 528 tcaacaagaagtttagatggaaaatcttgaattctttcgatatgttgaaataaatacttt 469
Query: 121 ggtggataatttaaatggaaagatttattttagtttaatttaactttgtttttattttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ggtggataatttaaatggaaagatttattttagtttaatttaactttgtttttattttta 409
Query: 181 cattgccatcaaaaaatcatagtatttaattttgtttcttgagttaggaattgtatcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cattgccatcaaaaaatcatagtatttaattttgtttcttgagttaggaattgtatcacc 349
Query: 241 aaatgctactttatgtgtttaagctattattggttcaaaattccatgatttttgctcagt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aaatgctactttatatgtttaagctattattggttcaaaattccatgatttttgctcagt 289
Query: 301 tatagtgttgttaagtgtaacaagagaatgttattctcatttatttttttcatctcgaat 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 288 tatagtgttgttaagtgtaacaagagaatgctattctcatttatttttttcatctcgaat 229
Query: 361 aagtaaattttagagcaagttatgaccc 388
||||||||||||||||||||||||||||
Sbjct: 228 aagtaaattttagagcaagttatgaccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_l04.g1 MSMg01no502_l04.g1 CHROMAT_FILE:
MSMg01no502_l04.g1 PHD_FILE: MSMg01no502_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:48 2005
(634 letters)
>mm_chr2_100505773_100506807
Length = 1035
Score = 1174 bits (607), Expect = 0.0
Identities = 628/635 (98%), Gaps = 1/635 (0%)
Strand = Plus / Plus
Query: 1 attatttaataatgtgaacattcagatcttccaagagataaactaatataaacaaatttt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatttaatactgtgaacattcagatcttccaagagataaactaatataaacaaatttt 260
Query: 61 cagtttatgttgcttctgttttaatatggagggaagttattttccttgattaatgattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtttatgttgcttctgttttaatatggagggaagttattttccttgattaatgattaa 320
Query: 121 gagggtagcatttattttctcagaaactatttttaatctaccatgaatcaggtatggtat 180
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 321 gagggtagcatttattttctcagaatctgtttttaatctaccatgaatcaggtatggtat 380
Query: 181 ttagttttaaggagtgtaggtatcactttagattccttgcactgtgttccatgagaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagttttaaggagtgtaggtatcactttagattccttgcactgtgttccatgagaaagg 440
Query: 241 -aaaaatataataattgaatttgacatttagtccattcatatgggaaactacagtgtaaa 299
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaacataataattgaatttgacatttagtccattcatatgggaaactacagtgtaaa 500
Query: 300 ggtctaaacaggaagaaagtgttttccattaaagtatcatgtgcaatgaaagatattttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtctaaacaggaagaaagtgttttccattaaagtatcatgtgcaatgaaagatattttt 560
Query: 360 ctgttttattcttgaaaaatgagtgtctcatgagaatgtcaatattttcaataacaagtc 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 ctgttttattcttgaaaaatgagtgtctcatgagaatgtcaatattttcactaacaagtc 620
Query: 420 aaaatttgctaaaattgaaaatgtcagagtaagatagcagttattggttaagttctcact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaatttgctaaaattgaaaatgtcagagtaagatagcagttattggttaagttctcact 680
Query: 480 atatgatagtatggtgtcaatgccttcactgtcttcaccacatataatctttacaatcat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatgatagtatggtgtcaatgccttcactgtcttcaccacatataatctttacaatcat 740
Query: 540 tccatgatattggagtttaacacagatttttttgcaaggggggaatccttaacaagaaag 599
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 tccatgatattggagtttaacacagatttttttgcaaggggggaatcgttaacaagaaag 800
Query: 600 tacagtaacatgctcaaggctgttgaaaaaatagc 634
|||||||||||||||||||||||||||||||||||
Sbjct: 801 tacagtaacatgctcaaggctgttgaaaaaatagc 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space: 639600
Effective search space used: 639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
