Query= MSMg01no502_o23.b1 MSMg01no502_o23.b1 CHROMAT_FILE:
MSMg01no502_o23.b1 PHD_FILE: MSMg01no502_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:05 2005
(519 letters)
>mm_chr2_77006791_77007710
Length = 920
Score = 959 bits (496), Expect = 0.0
Identities = 514/520 (98%), Gaps = 1/520 (0%)
Strand = Plus / Plus
Query: 1 ctctagacagagagggacacttcacagaggtagagcggggtggaacttcactatggacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctagacagagagggacacttcacagaggtagagcggggtggaacttcactatggacca 260
Query: 61 gacctgggcttttcctgcccatcaatacaaactttgctctctgaagaggctgaagtgcct 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacctgggctttccctgcccatcaatacaaactttgctctctgaagaggctgaagtgcct 320
Query: 121 tttctttggagatggcagtggggaagggagctggagaggggaccgtgagtggtttttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctttggagatggcagtggggaagggagctggagaggggaccgtgagtggtttttctg 380
Query: 181 agaaacagaatccagcttaaaagacttttctatattgttgttaaagtttgtatgttcgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaacagaatccagcttaaaagacttttctatattgttgttaaagtttgtatgttcgtt 440
Query: 241 gtacctctgactatctcataggttgttgtttaagtattgtgactccgtctactctatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtacctctgactatctcataggttgttgtttaagtattgtgactccgtctactctatgaa 500
Query: 301 tgttttaagtttgagaaaaagtaatgtttactaaaaaacaaaaa-gtcctagatttgctt 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tgttttaagtttgagaaaaagtaatgtttactaaaaaacaaaaaagtcctagatttgctt 560
Query: 360 ctcttccatccctgctggaatctacatgttgcccaaagcgtctttaaatcgtgtgcgagt 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 ctcttccatccctgctggaatctacatgttgcccaaagcgtctttaaatcgtgtgcaagt 620
Query: 420 gacctgattgcactggggaagccatagtccttgtcattcccactcacacctctactgagg 479
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 621 gacctgattgcactggggaagccatggtccttgtcattcccactcacacctctgctgagg 680
Query: 480 acaggatggggagtggagctgaagtcctgtttgttgtgca 519
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 acaggatggggagtggagctgaagtcctatttgttgtgca 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_o23.g1 MSMg01no502_o23.g1 CHROMAT_FILE:
MSMg01no502_o23.g1 PHD_FILE: MSMg01no502_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:05 2005
(543 letters)
>mm_chr2_77160608_77161550
Length = 943
Score = 661 bits (342), Expect = 0.0
Identities = 354/358 (98%)
Strand = Plus / Minus
Query: 1 aaaccatcacaaattgcctgagaaactggatttctggcattggtaagattaggatgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aaaccatcacaaattgcctgagaaactggatttctggcattggtaagattaggatgttca 299
Query: 61 ttctttaccagaaaagtatgtggaagtatcacacagaaaatgtttacagtttgtgagtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ttctttaccagaaaagtatgtggaagtatcacacagaaaatgtttacagtttgtgagtgc 239
Query: 121 acaggaagagcaaccataatactaacaagaaacagttaccgccaatcaaatatggctact 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 238 acaggaagagcaaccataatactaacaagaaacagttaccgtcaatcaaatatggctact 179
Query: 181 ttcagtgcttctatggctaacaaacatagcattcacatttgcacatggctgaaaacttca 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 178 ttcagtgcttctatggctaacaaacatagcattcacatttgcacatggttgaaaacttca 119
Query: 241 aaagacgaataatgtttgtgatattttaaaaattatatggaatttaatgtccataaagaa 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aaagatgaataatgtttgtgatattttaaaaattatatggaatttaatgtccataaagaa 59
Query: 301 agttttaatagtgtagttatattcctgaattcatataacctgtactcttgtatggtaa 358
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 58 agttttaatagtgtagttatattcctgaattcatataacctatactcttgtatggtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
