CCCTTTTTTTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCA
GGATCCGCGGAATTCCTTCTTTATGTCCTCTACCATCATCATGAGATATG
CTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCCTGGATTG
GGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTCCTGGCTTCT
GTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAATCTCTGGAGT
TAGTTGTTATAGTTGTCTTTGTTAAAAGATTGTTCCTCTGTTGATTTTGT
TACCCTCTATCAGCAGGCGTGGGAGACAAGCTCTCTTCTCTGAGTTTCAG
TGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAAGGTGTA
CAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGCCCAAAA
CAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCAGTT
GTCTGGAGTCGAAGATGTCGCAGCCTCAGAAGCTCTGTGGCTCTTGCCGG
GAAGGTGTCTGGTTGTCTGGAGCTGAGGATGGTGCCGCCCCAGAATCTCT
GCGACTCTCTCGCCCGTCCCAGAAATGGCTGGCACTCTGTATTCCACACG
GTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCTGGAGCCTAGAAGGCTCC
CGCCGGCGCCTGTGGCACAAACCTCTCATGCCACGC

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXAATAGCCATAAGTTATATTTAAAAACCTAAGTAGCAGTTCT
GTTTGATTATGCAATCAAGGTTTGCATTAAAAAAGGTGACAATTGAATTT
TACTCTGAACATTAATAAGTTATAGGATAACTATATATGTGAGATCTAGC
TAATATATGCAGTTATTGAAGCTAATGAATGGAACTAATGAAAAGGAATT
TAGCACCGTCTTCAGTGGTCTCTAGGAATTTCCAACAAGGGCCTCCAGCT
GATTTGATGGATAACTGTGAAAGCGGTGCATTACAAAAGATATAAAGATA
ATGTCTTCTTAATTTAGATATTAAATCTTAAGCACCAAAATAAAGGGTAG
CCAATAAAACTTGTGTTTTAAAATGTTCTGCAAGTAGTCAGCAACCATGT
TCCCGTAGTATGCAAGCATGTCTCATTAACCTTCCTAGAAATGAGACAAA
AGGTGGAGAAGAAGAATCAAGATCTCGGCAGCCATACAGCCTGGGGTTCT
CACGCTGGCTGGGCCATTGCTGGGTTAGGTGGTTCCCTGCATGTTATTGG
ACTTCTCTGAGCTTCTGCTTCAAAAGTCTAGTTCATCATATGAGCATCTC
CCTCATGCACTGGGGGTAAAGAATGTGGTGTT

Query= MSMg01no503_j20.g1 MSMg01no503_j20.g1 CHROMAT_FILE:
MSMg01no503_j20.g1 PHD_FILE: MSMg01no503_j20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:57 2005
         (518 letters)



>mm_chr2_43460502_43461419
          Length = 918

 Score =  971 bits (502), Expect = 0.0
 Identities = 514/518 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatagccataagttatatttaaaaacctaagtagcagttctgtttgattatgcaatcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagccataagttatatttaaaaacctaagtagcagttctgtttgattatgcaatcaag 260

                                                                       
Query: 61  gtttgcattaaaaaaggtgacaattgaattttactctgaacattaataagttataggata 120
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttgcattaaaaaaggtgacaattgaattttactctgaacattaataagttataggata 320

                                                                       
Query: 121 actatatatgtgagatctagctaatatatgcagttattgaagctaatgaatggaactaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actatatatgtgagatctagctaatatatgcagttattgaagctaatgaatggaactaat 380

                                                                       
Query: 181 gaaaaggaatttagcaccgtcttcagtggtctctaggaatttccaacaagggcctccagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaaggaatttagcaccgtcttcagtggtctctaggaatttccaacaagggcctccagc 440

                                                                       
Query: 241 tgatttgatggataactgtgaaagcggtgcattacaaaagatataaagataatgtcttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatttgatggataactgtgaaagcggtgcattacaaaagatataaagataatgtcttct 500

                                                                       
Query: 301 taatttagatattaaatcttaagcaccaaaataaagggtagccaataaaacttgtgtttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatttagatattaaatcttaagcaccaaaataaagggtagccaataaaacttgtgtttt 560

                                                                       
Query: 361 aaaatgttctgcaagtagtcagcaaccatgttcccgtagtatgcaagcatgtctcattaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaatgttctgcaagtagtcagcaaccatgttcccgtagtatgcaagcatgtctcattaa 620

                                                                       
Query: 421 ccttcctagaaatgagacaaaaggtggagaagaagaatcaagatctcggcagccatacag 480
           |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 621 ccttcctagaaacgagacaaaaggtggagaagaagaaccatgatctcggcagccatacag 680

                                                 
Query: 481 cctggggttctcacgctggctgggccattgctgggtta 518
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctggggttctcacgctggctgggccattgctgggtta 718


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space:   461264
Effective search space used:   461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)