CGTTTTTTCCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTC
AGGATCCGCGGAATTCACTTTGTATTCCCGGCTGGCCTCCAACTCAGAAA
TCTGCCTGCCTTTGCCTCCCGAGTGCTGGGATTAAAGGTGTATACCACTA
TGCCTGACTATGTTTTTTTTTTAATATTATTCTCACATTAACTGAATTTT
GTAGGTTGCCAGTGCCTTGTATCTTAATTGCTCTTTCAAATCCCTTAACA
AAGTGAAAACTGTGATTCAGTAAGCACATAGCTGAGTATGATAATAAGAC
CATACAACAGATATGATTGGTGTACTGTTTAATCTATGGAAAAAATGGGA
TAAAGTACTTGAAATGGGTATAAAATAGAAATATCAAATGGTGATAAAAT
GTAATGCACAACCAAGACATTTATGTAATTTTGTTATTTTAAATTGCTGA
TTTCATTTCTCCAATTAGCAGTATGAAAATAGAATTAGAATCTAAAGGCT
AAGGTTTGAATCTTTTCTTGAATTTTTTTTTCTTAAAATCAGTTGAAATA
TAAAGGCCCATTTCCTAAGTTCGAAAGAACCACAGGACATCGTGAAGTTG
GCAGTATTTCTTTCATTTGTATGAAGAAACTGTATTTTGCAATTAAGTTA
TATTTTGACATGTGAATCAATTGTTTTCTTGGAGCATTGATAGAATACCT
GCTTTGACATTTATTACTATC

CCTTTTTTTTTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGGTGGTGCGA
AAGAAACCATAGATTTCTNATTGATCTGGCTAATACTCTTCAGTGAACAT
ATACTGACAAACAGAAAACTGAAACATTTGTCCTATGTTAGTATTATATT
CACTGCTATTACAGTNTGATGTTAAATAGTATGGTTTATAATACTTTACC
AGGTAAAATCAGTCACCAATTACCTTTCTGCAAGGTAGGCAGCCCAGAAA
AACATCATGGTGAGCCTATCTCTATTTACCCCTCTATGTTTCTGAAACCC
TGAACCAGGTACTTTTCGGGCCCCGCTTAAATTTGCACAGGGTCCTAATA
AATCTCAAATTTCCCTTTTTATTGTTCGGGGAAACCCAAATATCCCAACA
CCCGGTGTTTCCCCAATTTTTTTTTTCTTTCTGGAAGAAAAAAACCCCCC
GTATATTTTTTAATAAAAACATTTTTTAACCCGGTTCCCCCCCTTTTAAA
AATTCCCCCCGTTTTTTATTTTTTTTCCCAAAAAAAAAAAAAAGGGGGGG
GTTATTTTTCAATAAAACCCCTCCCTTTTTTTATTTAAAAACCCCCCCTT
TTTTTTTATAAAAACTTCTCCGGCCCTTTTAAATTACCCCCTTTTTAGGA
GGAAAAAAACACCCTTCTCTTTTTT

Query= MSMg01no503_l05.b1 MSMg01no503_l05.b1 CHROMAT_FILE:
MSMg01no503_l05.b1 PHD_FILE: MSMg01no503_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:03 2005
         (525 letters)



>mm_chr2_42752081_42753006
          Length = 926

 Score =  909 bits (470), Expect = 0.0
 Identities = 511/526 (97%), Gaps = 5/526 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactttgtattcccggctggcctccaactcagaaatctgcctgcctttgcctcc 63
           |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattcactttgtagaccaggctggcctccaactcagaaatctgcctgcctttgcctcc 261

                                                                       
Query: 64  cgagtgctgggattaaaggtgtataccactatgcctgactatgtttttttttt---aata 120
           ||||||||| |||||||||||| |||||||||||||| |||||||||||||||   ||||
Sbjct: 262 cgagtgctgagattaaaggtgtgtaccactatgcctgtctatgttttttttttttaaata 321

                                                                       
Query: 121 ttattctcacattaactgaattttgtaggttgccagtgccttgtatcttaattgctcttt 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttgttctcacattaactgaattttgtaggttgccagtgccttgtatcttaattgctcttt 381

                                                                       
Query: 181 caaatcccttaacaaagtgaaaactgtgattcagtaagcacatagctgagtatgataata 240
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 382 caaatcccttaacaaagtgaaaactgtgat-cagtaagcacatagctgagtatgataata 440

                                                                       
Query: 241 agaccatacaacagatatgattggtgtactgtttaatctatggaaaaaatgggataaagt 300
           || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 aggccatacaacagatatgattggtatactgtttaatctatggaaaaaatgggataaagt 500

                                                                       
Query: 301 acttgaaatgggtataaaatagaaatatcaaatggtgataaaatgtaatgcacaaccaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 acttgaaatgggtataaaatagaaatatcaaatggtgataaaatgtaatgcacaagcaag 560

                                                                       
Query: 361 acatttatgtaattttgttattttaaattgctgatttcatttctccaattagcagtatga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatttatgtaattttgttattttaaattgctgatttcatttctccaattagcagtatga 620

                                                                       
Query: 421 aaatagaattagaatctaaaggctaaggtttgaatcttttcttgaattttttttt-ctta 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 aaatagaattagaatctaaaggctaaggtttgaatcttttcttgaattttttttttctta 680

                                                         
Query: 480 aaatcagttgaaatataaaggcccatttcctaagttcgaaagaacc 525
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatcagttgaaatataaaggcccatttcctaagttcgaaagaacc 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space:   471740
Effective search space used:   471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)