Query= MSMg01no506_a14.b1 MSMg01no506_a14.b1 CHROMAT_FILE:
MSMg01no506_a14.b1 PHD_FILE: MSMg01no506_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:05 2005
(676 letters)
>mm_chr2_112667601_112668676
Length = 1076
Score = 1232 bits (637), Expect = 0.0
Identities = 667/677 (98%), Gaps = 2/677 (0%)
Strand = Plus / Plus
Query: 1 tcatcaccagaacattgggattatagatgctcgcactctgcatcagcctcacact-agag 59
|||||||| |||||||||||||||||||||| |||||||||||||||||| | | ||||
Sbjct: 201 tcatcaccggaacattgggattatagatgctaacactctgcatcagcctcata-tgagag 259
Query: 60 ttttagggattcacaaccaggtcttcacacttgtgtaggaagtgcttttatacactagac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttttagggattcacaaccaggtcttcacacttgtgtaggaagtgcttttatacactagac 319
Query: 120 ccgctccccacttgcttctgtttttctcatagacaaagttgctttgaacattttatatac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccgctccccacttgcttctgtttttctcatagacaaagttgctttgaacattttatatac 379
Query: 180 tttttattcacatgtctgatcatcttcttataataaattagaagcaaaatgaatggagca 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 380 tttttattcacatgtctgatcatcttcttataataaactagaagcaaaatgaatggagca 439
Query: 240 acaggtctgtttattttaatggcttgcaatatgaattgcaaattgcttcccagaaatctc 299
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acaggtctgtaaattttaatggcttgcaatatgaattgcaaattgcttcccagaaatctc 499
Query: 300 acaacaatttgcattattccaaatttatataagtgtgtgttactttgccatctctattac 359
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acaacaatttccattattccaaatttatataagtgtgtgttactttgccatctctattac 559
Query: 360 agtaatgagagcttaacacattttcaaatattttccagttagatgggtgaagaatgtcat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtaatgagagcttaacacattttcaaatattttccagttagatgggtgaagaatgtcat 619
Query: 420 atccctgttgctttaatttgcatttaattgctgaggttgaaatttactttccacacatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atccctgttgctttaatttgcatttaattgctgaggttgaaatttactttccacacatta 679
Query: 480 agtctaattttattgcatattttgtaaattttttctgatgctcttcatctatttttctac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agtctaattttattgcatattttgtaaattttttctgatgctcttcatctatttttctac 739
Query: 540 caggtaattatccatttgaaaattagttggtggagtgcttttcacatttgtcaacttagg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caggtaattatccatttgaaaattagttggtggagtgcttttcacatttgtcaacttagg 799
Query: 600 cattttataatatatactcaacagatttctggagttttagttatttatattatatactca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cattttataatatatactcaacagatttctggagttttagttatttatattatatactca 859
Query: 660 atagatttcttgagatt 676
|||||||||||||||||
Sbjct: 860 atagatttcttgagatt 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_a14.g1 MSMg01no506_a14.g1 CHROMAT_FILE:
MSMg01no506_a14.g1 PHD_FILE: MSMg01no506_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:05 2005
(246 letters)
>mm_chr2_112723074_112723722
Length = 649
Score = 443 bits (229), Expect = e-129
Identities = 243/249 (97%), Gaps = 3/249 (1%)
Strand = Plus / Minus
Query: 1 aggtcatcaggcttgcttactgcacacttcactcatctgagccatatcctaatttggtaa 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aggtcatcaggcttgctcactgcacacttcactcatctgagccatatcctaatttggtaa 390
Query: 61 ttctcagtcactattcatccatcagagtc---caaagcagtgggagagacttatatttga 117
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 389 ttctcagtcactattcatccatcagagtccttcaaagcagtgggagagacttatatttga 330
Query: 118 tttgggtgggccttgctttggaatatcttcttgatgatgaactcagaagaggtaaaggag 177
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 329 tttgggtgggccttgctttggaatctcctcttgatgatgaactcagaagaggtaaaggag 270
Query: 178 tgggtcaatggatgctatccatatttagaagacatttctagcatctcatctccacgtcag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgggtcaatggatgctatccatatttagaagacatttctagcatctcatctccacgtcag 210
Query: 238 cagattgtg 246
|||||||||
Sbjct: 209 cagattgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 649
Length adjustment: 9
Effective length of query: 237
Effective length of database: 640
Effective search space: 151680
Effective search space used: 151680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
