Query= MSMg01no506_p23.b1 MSMg01no506_p23.b1 CHROMAT_FILE:
MSMg01no506_p23.b1 PHD_FILE: MSMg01no506_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:23 2005
(599 letters)
>mm_chr2_41910787_41911785
Length = 999
Score = 1069 bits (553), Expect = 0.0
Identities = 562/565 (99%)
Strand = Plus / Minus
Query: 5 gaattcacttttaaaggcctcgtaattctgagtatttatgggcttcctctgctcattccg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaattcacttttaaaggcctcgtaattctgagtatttatgggcttcctctgctcattccg 506
Query: 65 atttctttagacttcatcttccagtagttcctttcttgtgttataaaagaagagtgatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atttctttagacttcatcttccagtagttcctttcttgtgttataaaagaagagtgatat 446
Query: 125 tgtttgtttgtgtatgtattgctcctgtaattaactgtttgttaggtcagaatgatatgt 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtttgtttgtgtgtgtattgctcctgtaattaactgtttgttaggtcagaatgatatgt 386
Query: 185 gtatggttgttctgagcaaggatactcttaatttctaaaggccatagtccaaatcagaac 244
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 385 gtatggttgttctgagcaaggatagtgttaatttctaaaggccatagtccaaatcagaac 326
Query: 245 ttgaatatctgggagtattgtctttggggactttgtgtcctagttctggaagattcactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgaatatctgggagtattgtctttggggactttgtgtcctagttctggaagattcactg 266
Query: 305 ccaatagatggtgctattaggttacaaacttttcaagaataaaacttaaaaccaatgcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaatagatggtgctattaggttacaaacttttcaagaataaaacttaaaaccaatgcag 206
Query: 365 ttcagacttaagtgaactttacagtcagtcaaagtattgatgggacacggattgctatgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttcagacttaagtgaactttacagtcagtcaaagtattgatgggacacggattgctatgt 146
Query: 425 cctttcctgtaaagtctgtttcaagttatgagttgggcacaaacatttggatttctagca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cctttcctgtaaagtctgtttcaagttatgagttgggcacaaacatttggatttctagca 86
Query: 485 gtacacatgtggaggattcttcaacagtaatttggacaattctttaccagaaaatcagaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gtacacatgtggaggattcttcaacagtaatttggacaattctttaccagaaaatcagaa 26
Query: 545 aactaacattttagaaattaaagct 569
|||||||||||||||||||||||||
Sbjct: 25 aactaacattttagaaattaaagct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_p23.g1 MSMg01no506_p23.g1 CHROMAT_FILE:
MSMg01no506_p23.g1 PHD_FILE: MSMg01no506_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:23 2005
(530 letters)
>mm_chr2_41769754_41770685
Length = 932
Score = 971 bits (502), Expect = 0.0
Identities = 524/532 (98%), Gaps = 2/532 (0%)
Strand = Plus / Plus
Query: 1 tcttgcttcagaatttaatggattcagtcttcagaattggggaatgttgtttatgacatg 60
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 201 tcttgcttcagaatttaatggattcagtcttcagaattggcgaatgttctttatgacatg 260
Query: 61 caaatattgagactggaaatttaaatggagtaggacttggtggtaaaggatgaaggaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatattgagactggaaatttaaatggagtaggacttggtggtaaaggatgaaggaaca 320
Query: 121 cagatgtctccagtgttctaattccaggttcttatgcctttctcatgatgtctctgtaat 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagatgtttccagtgttctaattccaggttcttatgcctttctcatgatgtctctgtaat 380
Query: 181 gctgtctgtctcccagcagacaagtgaatgtgtatcagtgtgctctgtgaagatgctgga 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gctgtctgtctcccagcagacaagtgaatgtggatcagtgtgctctgtgaagatgctgga 440
Query: 241 ccagtttgttgtatggactc--tgtcaactcttcacaatacacatgtttgtaagtgtctt 298
||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagtctgttgtatggactctatgccaactcttcacaatacacatgtttgtaagtgtctt 500
Query: 299 ctgtgctaaaagtaaattctcacagagtgtaccaccatgatagagacaacagttcctgca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtgctaaaagtaaattctcacagagtgtaccaccatgatagagacaacagttcctgca 560
Query: 359 acaggagcaatcaggaacagcagactgaggctggacccaacactatggttgaatgcctat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaggagcaatcaggaacagcagactgaggctggacccaacactatggttgaatgcctat 620
Query: 419 atagcctgtcacatcaagaaagaatcatgaaatttcttcagttacaatctacctttcctg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atagcctgtcacatcaagaaagaatcatgaaatttcttcagttacaatctacctttcctg 680
Query: 479 tctcatttggcaatgcactcctgcttgttgtctgcaataaggaaccctcttg 530
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctcatttggcaatgcactcctgcttgttgtctgcaataaggaaccctcttg 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 932
Length adjustment: 10
Effective length of query: 520
Effective length of database: 922
Effective search space: 479440
Effective search space used: 479440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
