Query= MSMg01no508_e10.b1 MSMg01no508_e10.b1 CHROMAT_FILE:
MSMg01no508_e10.b1 PHD_FILE: MSMg01no508_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:08 2005
(547 letters)
>mm_chr2_8014705_8015651
Length = 947
Score = 1025 bits (530), Expect = 0.0
Identities = 539/542 (99%)
Strand = Plus / Minus
Query: 6 gaattcaaaatgtttccaaaaggctcctgtgtatttgggaaatttgtattcctggggtgg 65
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gaattcaaaatgtcaccaaaaggctcctgtgtatttgggaaatttgtattcctggggtgg 688
Query: 66 gcttaaggactttagaacttttcagtctgcttaaagtctctattctctgtgtccttgtcc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gcttaaggactttagaacttttcagtctgcttaaagtctctattctctgtgtccttgtcc 628
Query: 126 tctgaaatgtacacaagtatccacagactcctgctgccagagataccatagatccacacg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tctgaaatgtacacaagtatccacagactcctgctgccagagataccatagatccacacg 568
Query: 186 gctaatgtgtggatctgccaccacattgggctctgttctcataaactatcagcaaaatac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gctaatgtgtggatctgccaccacattgggctctgttctcataaactatcagcaaaatac 508
Query: 246 atctcttaactcttttttctgccaggaataaatccagcaggacaagagaacccaaacatg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atctcttaactcttttttctgccaggaataaatccagcaggacaagagaacccaaacatg 448
Query: 306 gagttcagttatggcaaatgaattgggaagtatgatcgttagcagactttccaatgctat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gagttcagttatggcaaatgaattgggaagtatgatcgttagcagactttccaatgctat 388
Query: 366 cctccccacactgaaaaaaaaaatcagtacaacagtaggtatcttccctgatatttggta 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cctccccacactgaaaaaaaaaatcagtacaacagtaggtatcttccctgatatttggta 328
Query: 426 accacctttctttttcatgtttctcatctcaaggaaggacaacttgaatagatgaaatct 485
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 327 accacctttctttttcatgtttctcatctcaaggaagaacaacttgaatagatgaaatct 268
Query: 486 tatattggacataagagtaaatctgcttcttagaccttgaattgccccattaagcaaaga 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tatattggacataagagtaaatctgcttcttagaccttgaattgccccattaagcaaaga 208
Query: 546 tg 547
||
Sbjct: 207 tg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_e10.g1 MSMg01no508_e10.g1 CHROMAT_FILE:
MSMg01no508_e10.g1 PHD_FILE: MSMg01no508_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:08 2005
(541 letters)
>mm_chr2_7821108_7822048
Length = 941
Score = 1002 bits (518), Expect = 0.0
Identities = 536/542 (98%), Gaps = 2/542 (0%)
Strand = Plus / Plus
Query: 1 tccgagtctattgggttttagtgtgtcagtgttatttgctggttgattattctgggtaga 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccgagtctattaggttttagtgtgtcagtgttatttgctggttgattattctgggtaga 260
Query: 61 tactatctcaagactaaggttgacttaagttcaagctacatctctagttgctacttcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactatctcaagactaaggttgacttaagttcaagctacatctctagttgctacttcaga 320
Query: 121 caaagtttaattgcactcataaagcaatggaaaatggataactctccaacataaactcac 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaagtataattgcactcataaagcaatggaaaatggataactctccaacataaactcac 380
Query: 181 accatagacgaggttgtatgactagttgtaactgagagctattttgtaggtatagatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accatagacgaggttgtatgactagttgtaactgagagctattttgtaggtatagatata 440
Query: 241 ggcctgtgtgtcttcttccagactccctaattttcatgaggtgattcttggcaagaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcctgtgtgtcttcttccagactccctaattttcatgaggtgattcttggcaagaaatg 500
Query: 301 tagggaaatcttgagaactgcaatattttgtaggatttttttttctcatcatggaaccct 360
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 501 tagggaaatcttgagaactgcaatattttgtaggggttttttt-ctcatcatggaaccct 559
Query: 361 ctaaagttggattgcatcttttatggtggtctgcatcataaaacataggagatcataccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctaaagttggattgcatcttttatggtggtctgcatcataaaacataggagatcataccc 619
Query: 421 aagcaccttgagtctctaggaccacattgatacacagaagttgtgatgggggcgtcaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagcaccttgagtctctaggaccacattgatacacagaagttgtgatgggggcgtcaggg 679
Query: 481 atacttcaaaaatgtttcttttcctgaaatagtggcaggtgttttctctagtttctt-aa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 680 atacttcaaaaatgtttcttttcctgaaatagtggcaggtgttttctctagtttctttaa 739
Query: 540 tg 541
||
Sbjct: 740 tg 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
