Query= MSMg01no509_e12.b1 MSMg01no509_e12.b1 CHROMAT_FILE:
MSMg01no509_e12.b1 PHD_FILE: MSMg01no509_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:28 2005
(244 letters)
>mm_chr2_134095014_134095657
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 tttgactgtattcagagtcactcaataatagatgaaattagaaagttcatcagttggtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgactgtattcagagtcactcaataatagatgaaattagaaagttcatcagttggtgg 260
Query: 61 ttagctacacaaatcatggttcttctatgtggtagaacactgcatattaatgcaaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagctacacaaatcatggttcttctatgtggtagaacactgcatattaatgcaaattat 320
Query: 121 tgaactatcactcagatattacatatgaaataatcagtaaaaatgttattccatttatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaactatcactcagatattacatatgaaataatcagtaaaaatgttattccatttatgt 380
Query: 181 gacatttgaaagtattaaaactgtggaacaaagtttgttaggacaaaacatagagtaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacatttgaaagtattaaaactgtggaacaaagtttgttaggacaaaacatagagtaatc 440
Query: 241 ccta 244
||||
Sbjct: 441 ccta 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no509_e12.g1 MSMg01no509_e12.g1 CHROMAT_FILE:
MSMg01no509_e12.g1 PHD_FILE: MSMg01no509_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:28 2005
(610 letters)
>mm_chr2_134217792_134218799
Length = 1008
Score = 1064 bits (550), Expect = 0.0
Identities = 595/612 (97%), Gaps = 6/612 (0%)
Strand = Plus / Minus
Query: 1 aaaagaaccggccttggagtgttgatagataggttaagtgggcttttgaattggaatttt 60
||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 808 aaaagaaccagtcttggagtgttgatagataggttaagtggggttttgaattggcatttt 749
Query: 61 atttccacagtaatcggaaatactgaacactttttgattaagagtaaaaaaggagggcca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gtttccacagtaatcggaaatactgaacactttttgattaagagtaaaaaaggagggcca 689
Query: 121 tgaaaatctgtgtttaagtaactcttggttgtgctcaatatctatggattgaggaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tgaaaatctgtgtttaagtaactcttggttgtgctcaatatctatggattgaggaggatg 629
Query: 181 gaggtgtttaacactctgggtcaatgagaaacttgtgcttggcaaaatgacatagccaag 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 628 gaggtgtttaacactctgggtcaataagaaacttgtgcttggcaaaatgacatagccaag 569
Query: 241 atttttacaagtaaaattatctgtgcaaagatgctgctggacagcatcacaggaacaaga 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aaatttacaagtaaaattatctgtgcaaagatgctgctggacagcatcacaggaacaaga 509
Query: 301 gcaagcaagcttcttatacagttgaaaagtcagagaaatgtgctgtttcatctttaggat 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 508 gcaagcaagcttcttatacagtagaaaagtcagagaaatgtgctgtttcatctttaggat 449
Query: 361 attccctaaagtcaatctgatctgattttgggtaaaagaaactgagggttcacttatcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 attccctaaagtcaatctgatctgattttgggtaaaagaaactgagggttcacttatcta 389
Query: 421 taaactttctagtttttaaagaaatcatgaaaagaacattatcccatgttttaaatatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 taaactttctagtttttaaagaaatcatgaaaagaacattatcccatgttttaaatatta 329
Query: 481 cagatttcagaaaatttggaagtg--atccttgcttaatgagactcagaatttcttaatt 538
||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 328 cagattttagaaaatttgga---gcaatccttgcttaatgagactcagaatttcttaatt 272
Query: 539 ttagtgaacattttatatgaggttcaggattcaaaagaaaaaaagaaacccatcctttct 598
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 271 ttagtgaacattttatatgaggttcaggattcaaaagaaaaaa-gaaacccttcctttct 213
Query: 599 ataatcaggtag 610
||||||||||||
Sbjct: 212 ataatcaggtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1008
Length adjustment: 10
Effective length of query: 600
Effective length of database: 998
Effective search space: 598800
Effective search space used: 598800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
