TAACACGAGTTGGAGTTTCAAGGGGGGCATTCAAAAAGGGGGGGGGAGAG
GGGTTTTCCAAAAGAGGGGGGAGAGGAGAATAAACGGCATATAAGTTTCA
TGCAATTATTTATCTGAAACAGTGGGCTGGGGGGCTGTGTGGCGGATTCG
AGCATTGTATGCAGGCTTCTCTCCGGCAGTTGAGGCCGTAACTATACAGT
ACCATAACCTATCCCCTTATTGCTCCGCGGCCTACATTCCTGTCCCTTTC
TATCGTTAGGATGCTTGAATTGCAATATAAACGTAGTATATTCGCCGCGA
CCGGTCGTCCGTTTTTTTTCTAAAGTCCGACCATATCCTTGATAGGGTCG
TTAGCGGTGTTGTTCTTTTACCTCGTCTCTTTCCCGATTCCTTATAACTG
TAATTATACGCCTGTGTACTTCCCGGACCGCCCCTTTCGTATTCACAAAT
GCGACTTCATCCTAGGGAAGAGTAGACGGTGCACCGATGGTTCGGCAGGT
TCGAGGGGCCATTTATGGATAGTTACGGTTGCAGCATCACAAAGCCGAAC
ACATATTTAGACGCATTATTGTTGGTATATTTTACCCTCTTTCGCGCCGT
TCGCTTTTGACTGTTGTCTGCGCGTTTACTTCGCCATCGGCGTTATTTGT
GTCAAGCGGGGACAGTATTGATTATCCGCCAGTTTAATTATATATTATTC
TCTCTGACCTTTTCGTTCCTGCCACGACTCTTACCGCCCTATGGTCGTTA
TACCGTTTTTCCGCGCGGGGTTCTTATGCGTGGGTTTACGCTTTACGCCC
GACATATATATTCGAGGGGGAACACGGAAAGATAACAACACATATCATCA
TGTATGCGCGAGATAGCACGCGACTATACTTCAATATN

CCCGATGATAGTGAGTAGGCCGGGNGGNCGCCGGTACAAAAACACGGTTA
GGNGACACNANAGATTGCTAAAAAGGAGGTCCAGNACAATTAATGACTGC
TTAAAGATTTCATACACAGATACACGACTTCTTTTATATAAAGATGCTTT
TAAGAACATCAGGTGGCAGGGGCTGGAGAAATGGCACAGAGGTTTACTAC
ACAGACTTTTCTGTCAGAGGTCCTGAGTTCAATTCCCAGCCACCATATGG
TGTCTCTCAACCAACTATAATGGGATCGATGCCCTCTTGTGGTGTGTCTG
AAAACAGCTACAGTATACTCACTTATACTAAGTAAATATTTAAAAAAAAG
AGAGAGAACAACAGGTAGCAATAAATCATAAGTAAAGACTTTCTAGCTAT
AAACCTTAGCAGTAGCCCCACCTGATCAATTGTAATCCTGTTCAAGGCAC
CTTCAGAGGCTCACCTATCAAAAGGAGGGAGAAGATGTTTCATAGCGACT
GAGACATAACTTGCTTGAGAGTCACCAAAATGATATGTTACTATGCCCCA
CACGCATGCTTCTCCCTTGATAAACTCACATCCACACTTGGGTGTTCCTT
AACCTTTCTATTAACCTTCATGCATAAATGTTTGTTAAGCTTTCTATCTG
ATCAAGGGGCAGGGGCCGAGGGCATCACCTCTATGCCCAGCCACCCTATG
GCAGATGAGTGGCAGGGTCAGCTCTCCCACACTCGTGCCATCAGATAATG

Query= MSMg01no509_l12.g1 MSMg01no509_l12.g1 CHROMAT_FILE:
MSMg01no509_l12.g1 PHD_FILE: MSMg01no509_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:03 2005
         (647 letters)



>mm_chr2_50506038_50507084
          Length = 1047

 Score = 1181 bits (611), Expect = 0.0
 Identities = 638/651 (98%), Gaps = 8/651 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    caattaatgactgcttaaagatttcatacacagatacacgacttcttttatataaagatg 60
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1035 caattaatgactgcttaaagatttcatacacagaaacacgacttcttttatataaagatg 976

                                                                        
Query: 61   cttttaagaacatcaggtggcaggggctggagaaatggcacagaggtttactacacagac 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975  cttttaagaacatcaggtggcaggggctggagaaatggcacagaggtttactacacagac 916

                                                                        
Query: 121  ttttctgtcagaggtcctgagttcaattcccagccaccatatggtgtctctcaaccaact 180
            |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 915  ttttctgtcagaggtcctgagttcaattcccagccaccatatggtggctcacaaccaact 856

                                                                        
Query: 181  ataatgggatcgatgccctcttgtggtgtgtctgaaaacagctacagtatactcacttat 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 855  ataatgggatcgatgccctcttgtggtgtgtctgaaaacagctacagtatactcacataa 796

                                                                        
Query: 241  actaagtaaatatttaaaaaaaagagagagaacaacaggtagcaataaatcataagtaaa 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795  actaagtaaatatttaaaaaaaagagagagaacaacaggtagcaataaatcataagtaaa 736

                                                                        
Query: 301  gactttctagctataaaccttagcagtag----ccccacctgatcaattgtaatcctgtt 356
            |||||||||||||||||||||||||||||        |||||||||||||||||||||||
Sbjct: 735  gactttctagctataaaccttagcagtagttgt----acctgatcaattgtaatcctgtt 680

                                                                        
Query: 357  caaggcaccttcagaggctcacctatcaaaaggagggagaagatgtttcatagcgactga 416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679  caaggcaccttcagaggctcacctatcaaaaggagggagaagatgtttcatagcgactga 620

                                                                        
Query: 417  gacataacttgcttgagagtcaccaaaatgatatgttactatgccccacacgcatgcttc 476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619  gacataacttgcttgagagtcaccaaaatgatatgttactatgccccacacgcatgcttc 560

                                                                        
Query: 477  tcccttgataaactcacatccacacttgggtgttccttaacctttctattaaccttcatg 536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559  tcccttgataaactcacatccacacttgggtgttccttaacctttctattaaccttcatg 500

                                                                        
Query: 537  cataaatgtttgttaagctttctatctgatcaaggggcaggggccgagggcatcacctct 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499  cataaatgtttgttaagctttctatctgatcaaggggcaggggccgagggcatcacctct 440

                                                               
Query: 597  atgcccagccaccctatggcagatgagtggcagggtcagctctcccacact 647
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439  atgcccagccaccctatggcagatgagtggcagggtcagctctcccacact 389


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)