ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCACTCTGTTTACCAGGCTGGCCTCGAACTCAGATATCCTCCTGCCTCTG
CCTCTGCTTCCTGAGTGCTAGAATTAAAGGTATGTACCACCATGCCGGCT
TCTGTTGTACATTTTAAATTCTGCTTCTCCCACCTTCTGACTGTGCTTCT
AAGGACACCCGTGATTGCGCTGGAGCCTCCCAAATACTCCATATTAACCA
CACTTAAGTTATTATTGCATGTATGTGTTCATGGAATAAAGGGGGAGCAT
ATGTGCCAAGTGTGGAGGTCAGGAAAACTTTGTGAAGTCATTTCTCTACT
TCTACATTTATGTGGGTCCAGGGATTGAACTCAAGTTCCCAGGATGAACA
GCAAGCCCCTTTACTAGCTATGCCATCTTGCTGGTCCTTATACTAATCTT
GTTAATACCAGTGGCTTACAACTTCAAATTTTATAAACGCACACCAGGGT
GGTTAATATTAATCGTCTAAATTTGTTGGACGTTAGAATCACCACAGAAG
CAAATCTCTGGGCCTGTCTGTGAGATCTTTTCTAGATTGGGTTGACTGAT
GTGGAAAGAAAAAAAAAAAAAAAAAAGAAAGACCCTTTCTAATTTGGGCA
GCAGCATCCCATGAACTGGAGTCCAGGATTGCATAAAAAGAAGAAACTGG
GCTGAGTGGAAACATGTATCTCCCCCTGCTTCCTGACTGGGA

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCACAGGGAGAGTCTATAATGGGAAGC
ATGGAAGCTGTTGGCTAGTTTTATGTCAACATGACACAAACTAGAGCCAT
CAGAGTCCTGGGAGCCTCAACTGAGAAAATGCCTCAATAAGATCAGGCTG
TAGGCAGGTCTGTAAGGCATTTTCTTAATTAGTGATTGACGTGGGAGGGC
CCAGCCCACTGGGGGTGGTGCTATCCCTGGGCTGGTGGTCCTGGGTTCTA
TAAGAAAGAGGCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTTC
CAGCCCCAATGAAGTTTCTGTCCTGATTTCCTTCAGTGGGGGACACTGTT
GTGGAAGTATACGCCAAATAAACCTTTTCCTCCCTAGTTTGTTTTGGTCA
TGGTGTCTCTTCACAGTAACAGAACAGTGACTAAGATAGAAGCAGACAGC
CAGAGCGGGAACTGAGAGTATGATGAGGCTGTAAACTCTTAGACCATGCC
CCCATGACATCCTTCCTTCACATGGTTGTACTGGTAAAGGTTCCATTGCC
TCCCCATCATCTGTAATGGATCTACATCACCTGGGGATTGAGCACCTGAG
CCTGTGGGAACATTTCTCACTCATACCATCACATCCTGGGTTGTCATCCA
GCTCTCAGGGGCATCTTTGGTGAACTGAAGACTTCTTCACCGCGAAGTTG
ATCT

Query= MSMg01no511_d15.b1 MSMg01no511_d15.b1 CHROMAT_FILE:
MSMg01no511_d15.b1 PHD_FILE: MSMg01no511_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:02 2005
         (629 letters)



>mm_chr2_38509732_38510759
          Length = 1028

 Score =  982 bits (508), Expect = 0.0
 Identities = 560/584 (95%), Gaps = 14/584 (2%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcactctgtttaccaggctggcctcgaactcagatatcctcctgcctctgcctct 63
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ggaattcactctgtagaccaggctggcctcgaactcagatatcctcctgcctctgcctct 524

                                                                       
Query: 64  g---------ct---tcctgagtgctagaattaaaggtatgtaccaccatgccggcttct 111
           |         ||   |||||||||| ||||||| |||||||||||||||||| |||||||
Sbjct: 523 gtctctgcctctgcctcctgagtgccagaattagaggtatgtaccaccatgctggcttct 464

                                                                       
Query: 112 gttgtacattttaaattctgcttctcccaccttctgactgtgcttctaaggacacccgtg 171
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 463 gttgtacattttaaattctgcttctcccacc-tctgactgtgcttctaaggacacccgtg 405

                                                                       
Query: 172 attgcgctggagcctcccaaatactccatattaaccacacttaagttattattgcatgta 231
           ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 404 attacactggagcctcccaaatactccatattaaccacatttaagttattattgcatgta 345

                                                                       
Query: 232 tgtgttcatggaataaagggggagcatatgtgccaagtgtggaggtcaggaaaactttgt 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgtgttcatggaataaagggggagcatatgtgccaagtgtggaggtcaggaaaactttgt 285

                                                                       
Query: 292 gaagtcatttctctacttctacatttatgtgggtccagggattgaactcaagttcccagg 351
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggagtcatttctctacttctacatttatgtgggtccagggattgaactcaagttcccagg 225

                                                                       
Query: 352 atgaacagcaagcccctttactagctatgccatcttgctggtccttatactaatcttgtt 411
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 224 atgaacagcaagcccctttactagctatgccatctcgctggtccttatactaatcttgtt 165

                                                                       
Query: 412 aataccagtggcttacaacttcaaa-ttttataaacgcacaccagggtggttaatattaa 470
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 164 aataccagtggcttacaacttcaaaattttataaacgcacaccagggtggttaatattaa 105

                                                                       
Query: 471 tcgtctaaatttgttggacgttagaatcaccacagaagcaaatctctgggcctgtctgtg 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tcgtctaaatttgttggacgttagaatcaccacagaagcaaatctctgggcctgtctgtg 45

                                                       
Query: 531 agatcttttctagattgggttgactgatgtggaaagaaaaaaaa 574
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  agatcttttctagattgggttgactgatgtggaaagaaaaaaaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1028
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1018
Effective search space:   630142
Effective search space used:   630142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)