Query= MSMg01no511_n21.b1 MSMg01no511_n21.b1 CHROMAT_FILE:
MSMg01no511_n21.b1 PHD_FILE: MSMg01no511_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:50 2005
(570 letters)
>mm_chr2_78428721_78429690
Length = 970
Score = 1094 bits (566), Expect = 0.0
Identities = 569/570 (99%)
Strand = Plus / Minus
Query: 1 cttaatatttattatggttccaaatgataataatttaatgtgaattatatagaatacacg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 770 cttaatatttattatggttccaaatgataataatttaatgtgaattatatagaatacatg 711
Query: 61 attaaaagtaatttttatctgttttcaaacagggattatgctcttcagtcagaagtgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 attaaaagtaatttttatctgttttcaaacagggattatgctcttcagtcagaagtgctg 651
Query: 121 aggtatgcctttgagggatataatttcctatttgggtggggacattgaagaattaactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aggtatgcctttgagggatataatttcctatttgggtggggacattgaagaattaactta 591
Query: 181 tagactgagtcatttctagaactatctatgaacaaacacaggataccctagaagtcatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tagactgagtcatttctagaactatctatgaacaaacacaggataccctagaagtcatgt 531
Query: 241 atcaaactaaacaggtgatcttaggtaaatgtatcttatttttctaagaagatctgtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 atcaaactaaacaggtgatcttaggtaaatgtatcttatttttctaagaagatctgtgat 471
Query: 301 acatttggacacatcacaggtttcccatggttgagtcactttcaatggggcatgggcacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acatttggacacatcacaggtttcccatggttgagtcactttcaatggggcatgggcacc 411
Query: 361 tactgaatgtcttctgtgccagtgtgtggctaattggccatatgcccagattgctacagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tactgaatgtcttctgtgccagtgtgtggctaattggccatatgcccagattgctacagc 351
Query: 421 cctctttgggtcagtaatagtcctggttcttgggtgaagaactgctcacctctcagaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cctctttgggtcagtaatagtcctggttcttgggtgaagaactgctcacctctcagaggt 291
Query: 481 gaattaactctttctgaacactagggcaccattaagcacactagaaaaaaagtaatttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gaattaactctttctgaacactagggcaccattaagcacactagaaaaaaagtaatttac 231
Query: 541 tcaatggtcctctaaggacaccctggagaa 570
||||||||||||||||||||||||||||||
Sbjct: 230 tcaatggtcctctaaggacaccctggagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_n21.g1 MSMg01no511_n21.g1 CHROMAT_FILE:
MSMg01no511_n21.g1 PHD_FILE: MSMg01no511_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:51 2005
(544 letters)
>mm_chr2_78264951_78265894
Length = 944
Score = 998 bits (516), Expect = 0.0
Identities = 537/544 (98%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 1 ctgatgttaaaatgcttatgtttaagtaaaatttattgtacttaataatgtctaatgcac 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctgatattaaaatgcttatgtttaagtaaaatttattgtacttaataatgtctaatgcac 261
Query: 61 atgaggtgaaaatattcagaaactaaactatccgaaatgaagccatatattctttcttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atgaggtgaaaatattcagaaactaaactatccgaaatgaagccatatattctttcttgt 321
Query: 121 aattaaaaggggggaacgttctcaataaaaaaataataataaagaaaaaactatatgctg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 322 aattaaaaggggggaacgttctcaatagaaaaataataataaagaaaaaactatatgctg 381
Query: 181 agttttcaaaaataggtagcacaatttggagggagatttagcacattcatacgattttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agttttcaaaaataggtagcacaatttggagggagatttagcacattcatacgattttta 441
Query: 241 ttacagaatattgctagaactgtatttttaggcaatgttaatatcttaccatgcttgctc 300
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 442 ttacag-atattgctagaactgtatttttagataatgttaatatcttaccatgcttgctg 500
Query: 301 tataaataacactttcttataagtaactatgtatagaaatagacaaaacagtacacatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataaataacactttcttataagtaactatgtatagaaatagacaaaacagtacacatag 560
Query: 361 tacttagtaccacacgtggttttcagtcatcctttgggagttttgaactgaagtcaccat 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacttagtaccacaggtggttttcagtcatcctttgggagttttgaactgaagtcaccat 620
Query: 421 gactagacagggatactgcagagaagtgccacaaaactctccattgttattgctataaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gactagacagggatactgcagagaagtgccacaaaactctccattgttattgctataaca 680
Query: 481 ttatcacagataactcataaatcatcccttctaaaatcatgaatgggaccaaaagtttaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatcacagataactcataaatcatcccttctaaaatcatgaatgggaccaaaagtttaa 740
Query: 541 tatt 544
||||
Sbjct: 741 tatt 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
