TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTTCTTTATGTCCTCTACCGTCATCATGAGATATGCTTTTAAATCCAGG
TCTACCTTTTCAGGTGTGTTAGGGTGTCCTGGACTGGGCGAAGTGGGCGT
TCTGGGTTCTGATGATGGTGAGTGGTCCTGGTTTCTGTTAGTAGGATTCT
TACGTTTACCTTTTGCCATCTGGCAATCTCTGGAGTTAGTTGTTATAGTT
GTCTTTGTTAAGAGATTGTTCCTCTGTTGATTTTGTTACCCTCAATCAGC
AGGCGTGGGAGACAAGCTCTCTCCTCTGAGTTTCAGTGGTCAGAGCAGTC
TCTGCAGGCAAGCTCTCCTCTTTCCGGGAAGGTGTACAGTTATCTGGTGT
TTGGACCTCCTCCTGGCTGAAGGTGAAGGCCCAAAACAGGATCTTTCCCA
GAAGCTGTGTTGCTTTCGCCAGGAAGGTGGCCGGTTGTCTGGAGTCGAAG
ATGTCGCCGCCTCAGAAGCTCTGTGGCTCTCGCCAGGAAGGTGGCTAGTT
GTCTGGAGACGAAGATGGCGCCGCCCCAGAAGCTCTGCGACTCTCGCCCG
TCCCAGAAACGGCTGGCCTCTGTATTCCACAGGGTCTCCCGTGCAGCCTG
CCCTCCGCGGAGTCCCGGAACCAAGAAGGCTCCTGCCGGCGCCTGTGACA
CAAACCTCTCAGGCCGGGCAGACCCCCGTGCTCT

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATGAATACAAGAATTAAATAGGGTAAAGA
CACAGAAGTAGCACAACCCAAGTACAATATAGTCTTCATTATCAGCCTGA
CTTTTGAAATTTTTTCTTAATATATTTTTCCTTCATTTGAGGAGAAAACA
TGTTCTTATGGAATAGAATAATTTTCTTGTTCATATTCTATATATGGGCC
ACAGAAAGGGAGCAAAAGTAACCTGAGCTTTAGCCATGAACATATTCCTT
AAATTAGTAACAATACTACTAACTTTTATAAATGTACTTGAATAAGTAAA
GTTAATGCTAGACTTCTGATAAACAGTTTCAAACTAAGCCGTAAGTAACT
TTAAAAGTTTTATGTCCTAAGATAGCTATGCAACTGACGGTTTGACCATG
GAATAATTCACACAGCAAGAACAAAGATAAAAAACTCACAAATAGTTTCC
AGTTTATAAATTTTCATTGAAATTATAAGGCATTCATTGGTATCATGTCT
GTACATTATCAAATATCAAATATACTTTGTATTCTGTCAAGAGTGTCTCC
TTATCTGACAGTGCTTAGCTATAAGATACACGAGTCTGAGGACCTGATAT
TAAGACCAAGATCACTTGATCAAGATCACTTGATCAAGATGTACCTCTCT
AGTTTCACCTGCCTCTGCTGATCTGTACAGCACTACAN

Query= MSMg01no512_f04.g1 MSMg01no512_f04.g1 CHROMAT_FILE:
MSMg01no512_f04.g1 PHD_FILE: MSMg01no512_f04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:26 2005
         (667 letters)



>mm_chr2_46327774_46328840
          Length = 1067

 Score = 1265 bits (654), Expect = 0.0
 Identities = 663/666 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatacaagaattaaatagggtaaagacacagaagtagcacaacccaagtacaatata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaatacaagaattaaatagggtaaagacacagaagtagcacaacccaagtacaatata 260

                                                                       
Query: 61  gtcttcattatcagcctgacttttgaaattttttcttaatatatttttccttcatttgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttcattatcagcctgacttttgaaattttttcttaatatatttttccttcatttgag 320

                                                                       
Query: 121 gagaaaacatgttcttatggaatagaataattttcttgttcatattctatatatgggcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaaaacatgttcttatggaatagaataattttcttgttcatattctatatatgggcca 380

                                                                       
Query: 181 cagaaagggagcaaaagtaacctgagctttagccatgaacatattccttaaattagtaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagaaagggagcaaaagtaacctgagctttagccatgaacatattccttaaattagtaac 440

                                                                       
Query: 241 aatactactaacttttataaatgtacttgaataagtaaagttaatgctagacttctgata 300
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 aatactactaacttttataaatgtacttgaataaataaagttaatgctagacttctgata 500

                                                                       
Query: 301 aacagtttcaaactaagccgtaagtaactttaaaagttttatgtcctaagatagctatgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagtttcaaactaagccgtaagtaactttaaaagttttatgtcctaagatagctatgc 560

                                                                       
Query: 361 aactgacggtttgaccatggaataattcacacagcaagaacaaagataaaaaactcacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactgacggtttgaccatggaataattcacacagcaagaacaaagataaaaaactcacaa 620

                                                                       
Query: 421 atagtttccagtttataaattttcattgaaattataaggcattcattggtatcatgtctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atagtttccagtttataaattttcattgaaattataaggcattcattggtatcatgtctg 680

                                                                       
Query: 481 tacattatcaaatatcaaatatactttgtattctgtcaagagtgtctccttatctgacag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacattatcaaatatcaaatatactttgtattctgtcaagagtgtctccttatctgacag 740

                                                                       
Query: 541 tgcttagctataagatacacgagtctgaggacctgatattaagaccaagatcacttgatc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgcttagctataagatacacgagtctgaggacctgatattaagaccaagatcacttgatc 800

                                                                       
Query: 601 aagatcacttgatcaagatgtacctctctagtttcacctgcctctgctgatctgtacagc 660
           |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 801 aagatcacttgatcaagatgtacctctctagtttcacctgcctctgctgacctctacagc 860

                 
Query: 661 actaca 666
           ||||||
Sbjct: 861 actaca 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)