CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCACTTGAGGAATACCGAAGGGCTGAGAAGCACTTGAAAAAAGTGTTC
AACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCC
ACCTCACACCAGTCAGAATGGCTAGGATCAAAAATTCAGGTGACAGCAGA
TGCTGGCTAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGA
TTGCAAGCTTTTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAA
AATTGGACATAGTACTACCGGAGGATCCCGCAATACCCCTCCTGGGCATA
TATCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCACTATGTT
CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCAAGATGCC
CCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTATACAAAGGAG
TACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATG
GATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACTCAATCACAAAAGA
ACTCACATGATATGTATTCACTGATAAGTGGATATTAGCCCAGAGACTTA
TAACACCCAAGATATTAGATACAATTTTCAAAACACATGAAACTCACGAA
GAATGAAGACCAAAGTGTTGCCCCTTCTTATGATTGCGAACAA

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGTTAGCCTACCCCATGCAGTAACTTAT
CTGGAGGCAAAAAACAAGATGCCAACAGAAGATGGCTCCCTGCTTGTCAG
ATTGCTGCTCCCTGGGAACTAGTTAAGTTGAGGTGTGGAGGCACCTCAGG
GCTTCCATCAACACAGGTAGAGTTCTCTTTCTTGAGTAATCTGTACTTTA
GCAGCCTAGTTTTGTGTGCGCGTGCATGTACATGCATGTATGCATGCATG
TGTGAGTGTATAAATATTGGACAAATAAGAGGGGAAGGAGGTATGCGGAC
CTGGCATTTCTTTAGACAGTAAGTGAAGTCTCTTTCTAGGTGAGCCAGGG
CATCATCATGAGTGACTGCATTTGACATATAACTTGTCGCAGCCATCTCT
TCTGTCCAGACCTAGGCCCGGCTGGCGCAGAGGTCATGCTCCCTGAGACC
GCCCCCAAAGCACTGACAAGCTTGGCTTCTTCCTCCTACTTGAAGCAGCC
ATGCTATATTCTATGCCAAGCAGGCAGGACCCAGGGAACGATCACAATGC
ATTCCTCACCCTTTGGAATGGACAATACATGCCTCATAGTCTCGGACACA
GGGCCAAGGTCTCGCCTCTCTCTCTTTTTCACAAGCAAGCTTTTCTACCT
GGTTCCCTCCCATGTCCATGTCTGTTTCTCTATAT

Query= MSMg01no512_l03.g1 MSMg01no512_l03.g1 CHROMAT_FILE:
MSMg01no512_l03.g1 PHD_FILE: MSMg01no512_l03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:56 2005
         (606 letters)



>mm_chr2_4158769_4159774
          Length = 1006

 Score = 1093 bits (565), Expect = 0.0
 Identities = 595/607 (98%), Gaps = 6/607 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttagcctaccccatgcagtaacttatctggaggcaaaaaacaagatgccaacagaaga 60
           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 201 agttagcctaccccatgcagtaacttatccggaggcaaaaaccaagatgccaacagaaga 260

                                                                       
Query: 61  tggctccctgcttgtcagattgctgctccctgggaactagttaagttgaggtgtggaggc 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 tggctccctgcttgtcagattgctgctccctgggaactagttaagttggggtgtggaggc 320

                                                                       
Query: 121 acct-cagggcttccatcaacacaggtagagttctctttcttgagtaatctgtactttag 179
           | || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 a-ctacagggctcccatcaacacaggtagagttctctttcttgagtaatctgtactttag 379

                                                                       
Query: 180 cagcctagttttgtgtgcgcgtgcatgtacatgcatgtatgcatgcatgtgtgagtgtat 239
           ||||||||||||||||||||| ||||||||||||    ||||||||||||||| ||||||
Sbjct: 380 cagcctagttttgtgtgcgcgcgcatgtacatgc----atgcatgcatgtgtgtgtgtat 435

                                                                       
Query: 240 aaatattggacaaataagaggggaaggaggtatgcggacctggcatttctttagacagta 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aaatattggacaaataagaggggaaggaggtatgcggacctggcatttctttagacagta 495

                                                                       
Query: 300 agtgaagtctctttctaggtgagccagggcatcatcatgagtgactgcatttgacatata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agtgaagtctctttctaggtgagccagggcatcatcatgagtgactgcatttgacatata 555

                                                                       
Query: 360 acttgtcgcagccatctcttctgtccagacctaggcccggctggcgcagaggtcatgctc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 acttgtcgcagccatctcttctgtccagacctaggcccggctggcgcagaggtcatgctc 615

                                                                       
Query: 420 cctgagaccgcccccaaagcactgacaagcttggcttcttcctcctacttgaagcagcca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cctgagaccgcccccaaagcactgacaagcttggcttcttcctcctacttgaagcagcca 675

                                                                       
Query: 480 tgctatattctatgccaagcaggcaggacccagggaacgatcacaatgcattcctcaccc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgctatattctatgccaagcaggcaggacccagggaacgatcacaatgcattcctcaccc 735

                                                                       
Query: 540 tttggaatggacaatacatgcctcatagtctcggacacagggccaaggtctcgcctctct 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tttggaatggacaatacatgcctcatagtctcggacacagggccaaggtctcgcctctct 795

                  
Query: 600 ctctttt 606
           |||||||
Sbjct: 796 ctctttt 802


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space:   593616
Effective search space used:   593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)