TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAAT
TCCAGATAATTCTTTTAACTCTGTCAGTTTAATCCCCTGATAATTCCATT
CTCTAACATCACTACACTGTGAATTTGATAATTTTCCCAGTCAGGTAAGC
TTATATTTTTGCATTTTTTATTGTTTTGTAGGTGAAATCTTGTATGACTC
TCTGGACCACCTGGCCCTTACTGTGTATCCCACGGTCTCCAGGAACTTAT
GGTAACCCTCCTACCTCTGCATCATGGAGTGCTGAGAATATTGCTAAAAC
ACTAATTTTATTATGTATCCTATAATTTAAATATTGCCAAACACTCCTTA
TCTCTCTGACAAACTAATACACCTTAATTTGCCATGTATAGATAGATGAT
CCAAACTTCTATAGCTCAGGCTGGCTTTAGAGTACAGCTCTGGGTAACCT
GACATTTCTATTTTTTTGTCCTTTTTTTTTGGCATTTTCTTTATTAGGTA
TTTTGTTCATTTACATTTCCAATGCTATCCCAAAAGTCTTCCACATCCTC
CCCCTCCCCCCACTCCCCTACCCACCTATTCCCACTTCTTGGCCCTGGCG
TTCCCCTGTACTGAGGCTAATAAGGCTCCACTAGTAGATAATGTCTCTGA
TTCCTTATACTCTCTTTATCAAGCCCCTAGTTGCTGATTATAATGTAATT
TTGACACAACTTGACCTCTGCAACACCAACTGCTGACATTTCACTGN

ATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGTTCTTCTGGCTATCTCCTTTTATGTAT
GTTGAAGGATTACTTTCTTGCTTTTTATAGGGCGTGATTTCCCACCTTGT
GTTGGAGTTTTCCCTTTATTATCCTTTGAAGGCTGGATTCATGGAAAGAT
AGTGTGTGAATTTGGTTTTGTCATGGAATACTTTGGTTTCTCCATCTATG
GTAATTGAGAGTTTGGCTGTGTATAGTAGCCTAGGCTGGCATTTGTGCTC
TCTTAGGGTCTGTATAACATCTGTCCAGGATCTTCTGGCTTTCATAGTCT
CTGGTGAGAAGTCTGGTGTAATTCTAATTGGTCTGCCTTTATATGTTACT
TGACCTTTTTCCCTTACTGCTTTTAATATTCTATCTTTATTTAGTGCATT
TGTTGTTCTGATTATTATGTGTCCAGAGTAATTTCTTTTCTGGTCCAGTC
TATTTGGAGTTCTGTTTGCTTCTTGTATGTTCATGGGCATCTCTTTCTTT
AGGTCTGGGAAGTTTTCTTCTATAATTTTGTTGAAGATATTTACTGACCC
TTTAAGTTGAAAATCTTCATTCTCATCTACTCCTATTATCTGTAGGTTTG
CTCTCATTGTGTCCTGGATTTTGTGGATGTTTTGAGTTAGCATCTTTTTG
CACTTTGCATTTTCTTTTATTGTTGTGTCCATGTTCTCTATGGAATCN

Query= MSMg01no514_j08.b1 MSMg01no514_j08.b1 CHROMAT_FILE:
MSMg01no514_j08.b1 PHD_FILE: MSMg01no514_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:32 2005
         (656 letters)



>mm_chr2_8131628_8132683
          Length = 1056

 Score = 1127 bits (583), Expect = 0.0
 Identities = 622/641 (97%), Gaps = 10/641 (1%)
 Strand = Plus / Plus

                                                                       
Query: 16  gaattccagataattcttttaactctgtcagtttaatcccctgataattccattctctaa 75
           |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattccagataacccatttaactctgtcagtttaatcccctgataattccattctctaa 275

                                                                       
Query: 76  catcactacactgtgaatttgataattttcccagtcaggtaagcttatatttttgcattt 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 catcactacactgtgaatttgataattttcccagtcaggtaagcttatatttttgcattt 335

                                                                       
Query: 136 tttattgttttgtaggtgaaatcttgtatgactctctggaccacctggcccttactgtgt 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 336 tttattgttttgtaggtgaaatcttgtatgactctctggaccacctggcccttaccgtgt 395

                                                                       
Query: 196 atcccacggtctccaggaacttatggtaaccctcctacctctgcatcatggagtgctgag 255
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 396 atcccacggtctccaggaacttatgataaccctcctacctctgcatcatggagtgctgag 455

                                                                       
Query: 256 aatattgctaaaacactaattttattatgtatcctataatttaaatattgccaaacactc 315
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aatactgctaaaacactaattttattatgtatcctataatttaaatattgccaaacactc 515

                                                                       
Query: 316 cttatctctctgacaaactaatacaccttaatttgccatgtatagatagatgatccaaac 375
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 516 cttatctctctgacaaactaatacaccttaatttgccatgtatagatagatgattcaaac 575

                                                                       
Query: 376 ttctatagctcaggctggctttagagtacagctctgggtaacctgacatttctatttttt 435
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttctatagctcgggctggctttagagtacagctctgggtaacctgacatttctatttttt 635

                                                                       
Query: 436 tgtcctttttttttggcattttctttattaggtattttgttcatttacatttccaatgct 495
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 636 tgtcctttttttttggcattttctttattaggtattttcttcatttacatttccaatgct 695

                                                                       
Query: 496 atcccaaaagtcttccacatcctccccctccccccactcccctacccacctattcccact 555
           |||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct: 696 atcccaaaagtcttccacatcctccccctccccccactcccctacccacct--------- 746

                                                                       
Query: 556 tcttggccctggcgttcccctgtactgaggctaataaggctccactagtagataatgtct 615
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 -cttggccctggcgttcccctgtactgaggctaataaggctccactagtagataatgtct 805

                                                    
Query: 616 ctgattccttatactctctttatcaagcccctagttgctga 656
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ctgattccttatactctctttatcaagcccctagttgctga 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)