TTTTTAAACTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGAT
ACGCGGAATTCAGTTTTACCCTCCCTACAAAGCCAGGCAGGCTGCAAACT
GTTCCATGAAGCAGTCAGTGTGAGGTCCTCTGGAGTAAATGTCTCCCTCC
TTAGTGACTCCGCTATTTCTCATGGTTCTCTCTTCTGTGTCACTTAGGCC
TCCCGACGCTTATGAACGCTTGGGACTCCACTGGTCAGCTGTTTCTTGTG
CTTTTTCCTGGGTTCCCTCCTGGGTAACCTTTTAGGTTTCCAGAAAAATT
CCTTGCAGGGGTGGAGGCTAATAAGTGAGTTTATTGAATGACTATGTATT
CTAAAACACAGTTAGTGACTTAGAGGGTCACCCAAGGTGGTCCACATCCG
TGAGCTTCCGGTAGATCCTTGAGTGTTTCACTGGCATCCTTGTGGTGTGG
TATTGCAGCCACAGCCTGGCTGCCTAGTTGTGGCACAAGTACTTGGGCAC
TAGCCACAGTTGTTTTTAATTAGAAAGGTGTAATAGCGCCTTTTCGTTAC
CACTGCCCTTGAACATGGTACTTACTATTGATTTTAATTAGTCAACCTAG
ATTGCGTTCAGTCTTTATTCTAAAGCTGTTAGAGGCTGGCAACCCTTGGT
GATAGATCTTCACTTCAGGATGTGAACCTCTGAAGATCTCGAAACTATAA
AACAAAACAAAAACTAGATTTNAAAAAAATAGGAAGAATATAAACCCTGG
TGCTTGCAGGCAAAGGATGGGGGAATTCAG

ATACCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCATTTGCTTCACTATATGT
GTTGTATGTGTGTGTGTGTGTATGTATATATATATATATATATATATATA
TATATACACACACACACACACACACACGCGCGCGCCCAGAGAGTGTGGGG
GGGGGGGGGGGGGGGGGGGAGCCATATAGACACAGAGAGGGGGGGGGGGG
GGGGGGCGGGCGGGCGGCCCGCGCGGGGGGGCGGGGGGGAGAGAGAGAGA
GAGATATAGAGATATAGAGAGAGAGGCGCTGGTGTCGGCAGATAGAGTCC
CTGCGCCCGGCGAGCTCGCTCTGTGCCGGAGCGGGTGTGAGGGGGGGGGA
AGGCGTGGGGTGGGTGGGGGCCCCCCCCACCACGCGGGGAACGCTTGGCC
GACAGAGGGGGTTGCTCGCAGCATCGGGGGACGTCCCGAGGACGCGCTGC
GAGCGCTCCCCCGCGCGGGGGGGGCGGGGCGTCTACGCCTTCCCGGCACC
TGTCGCTGCAGCACCCCTAGGGGCGGGGGCGCTCCTGCGCCGCGTCGGAG
GTCAGTCGGCGCCGGCCCCGGCGCGGCTTCCTGTCTTCGATGGCCCACCC
GGCGCTCTTCCCGGGTCCCGCCTAGCGCCCCGCCGCAAGGGCCGGCGTGG
CGTTCCCCTAGCGTGTTTAACTGGCCGGTCTGCTTGCCCCCCCTCTGGTG
TCCCACGCACGCCGGTCCGTGGCGCCCCGCTCCCGATGGGGCGGCCCA

Query= MSMg01no515_k21.b1 MSMg01no515_k21.b1 CHROMAT_FILE:
MSMg01no515_k21.b1 PHD_FILE: MSMg01no515_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:06 2005
         (622 letters)



>mm_chr2_101973912_101974933
          Length = 1022

 Score = 1073 bits (555), Expect = 0.0
 Identities = 606/623 (97%), Gaps = 2/623 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattcagttttaccctccctacaaagccaggcaggctgcaaactgttccatgaagcagtc 60
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 aattcagttttacccaacctacaaagccaggcaggctgcaaactgttccatgaagcagtc 763

                                                                       
Query: 61  agtgtgaggtcctctggagtaaatgtctccctccttagtgactccgctatttctcatggt 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 762 agtgcgaggtcctctggagtaaatgtctccctccttagtgactccgctatttcttgtggt 703

                                                                       
Query: 121 tctctcttctgtgtcacttaggcctcccgacgcttatgaacgcttgggactccactggtc 180
           ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 702 tctcttttctgtgtcacttaggcctcccgacacttatgaacgcttgggactccactggtc 643

                                                                       
Query: 181 agctgtttcttgtgctttttcctgggttccctcctgggtaaccttttaggtttccagaaa 240
           || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aggtgtttcttgcgctttttcctgggttccctcctgggtaaccttttaggtttccagaaa 583

                                                                       
Query: 241 aattccttgc-aggggtggaggctaataagtgagtttattgaatgactatgtattctaaa 299
           ||| |||||| | ||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 582 aatcccttgcga-gggtggaggctaataagtgagttcattgaatgaatatgtattctaaa 524

                                                                       
Query: 300 acacagttagtgacttagagggtcacccaaggtggtccacatccgtgagcttccggtaga 359
           ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 523 acacagtcagtgacttagagggtcacccaaggtggtccacatccgtgtgcttccggtaga 464

                                                                       
Query: 360 tccttgagtgtttcactggcatccttgtggtgtggtattgcagccacagcctggctgcct 419
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 463 tccttgagtgtttcactggcatccttgtggtgtggtattgcagccgcagcctggctgcct 404

                                                                       
Query: 420 agttgtggcacaagtacttgggcactagccacagttgtttttaattagaaaggtgtaata 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agttgtggcacaagtacttgggcactagccacagttgtttttaattagaaaggtgtaata 344

                                                                       
Query: 480 gcgccttttcgttaccactgcccttgaacatggtacttactattgattttaattagtcaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gcgccttttcgttaccactgcccttgaacatggtacttactattgattttaattagtcaa 284

                                                                       
Query: 540 cctagattgcgttcagtctttattctaaagctgttagaggctggcaacccttggtgatag 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cctagattgcgttcagtctttattctaaagctgttagaggctggcaacccttggtgatag 224

                                  
Query: 600 atcttcacttcaggatgtgaacc 622
           |||||||||||||||||||||||
Sbjct: 223 atcttcacttcaggatgtgaacc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)