Query= MSMg01no516_n10.b1 MSMg01no516_n10.b1 CHROMAT_FILE:
MSMg01no516_n10.b1 PHD_FILE: MSMg01no516_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:43 2005
(609 letters)
>mm_chr2_85386419_85387426
Length = 1008
Score = 1131 bits (585), Expect = 0.0
Identities = 600/605 (99%), Gaps = 1/605 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtccatggtgtcagtgttaatgctgactaaattgcagtagagttgtataatca 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtccatggtgttagtgttaatgctgactaaattgcagtagagttgtataatca 264
Query: 65 ggaaggtggacacctttacccactaccatgcctgataccctctttctccaaagcagttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaaggtggacacctttacccactaccatgcctgataccctctttctccaaagcagttta 324
Query: 125 cattgagatttcaaagttgaggtgaatagaattgatgtaatgaaagattggctagatcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattgagatttcaaagttgaggtgaatagaattgatgtaatgaaagattggctagatcct 384
Query: 185 cttttattaatgtccaaagaagaatcaaggacaacacatcaccactgaacttctctaatg 244
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 cttttattaatgtccaaagaagaatcaaggacaacacttcaccactgaacttctctaatg 444
Query: 245 atgtgccctccacaggtaaggtgatctcatatttcctgaatttaggatgagctttcactc 304
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 445 atgtgccctccacaggtaaggtgatctcatatttcctgaatt-aggatgagctttcactc 503
Query: 305 caaattattaatctcaaaggtgtcttgacatatctcaaggaaactcataaatagaatggg 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caaattattaatctcaaaagtgtcttgacatatctcaaggaaactcataaatagaatggg 563
Query: 365 tacattataagaacatagttgaacatttaaagcataaatgagtatttattgagcaccaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tacattataagaacatagttgaacatttaaagcataaatgagtatttattgagcaccaat 623
Query: 425 gagtctgttactatcccaggaatttgggtagaagcaatagcttagtgaagggaattagga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gagtctgttactatcccaggaatttgggtagaagcaatagcttagtgaagggaattagga 683
Query: 485 gccaaaattaatatgatatgagtatcaaaaatgtaaataataagtaagatagatgttatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gccaaaattaatatgatatgagtatcaaaaatgtaaataataagtaagatagatgttatg 743
Query: 545 gtcactgatgatatagaataaaacaaaactagaaaggaaaatagaacatgtacgtgatat 604
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 744 gtcactgatgatatagaataaaacaaaactagaaaggaaaatagaacatgtatgtgatat 803
Query: 605 gccat 609
|||||
Sbjct: 804 gccat 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1008
Length adjustment: 10
Effective length of query: 599
Effective length of database: 998
Effective search space: 597802
Effective search space used: 597802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_n10.g1 MSMg01no516_n10.g1 CHROMAT_FILE:
MSMg01no516_n10.g1 PHD_FILE: MSMg01no516_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:43 2005
(223 letters)
>mm_chr2_85560198_85560820
Length = 623
Score = 431 bits (223), Expect = e-125
Identities = 223/223 (100%)
Strand = Plus / Minus
Query: 1 cagtgcaatgtgaaaaaatgaaaaaataacaacatacaaagtatcagcagaaaaaaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cagtgcaatgtgaaaaaatgaaaaaataacaacatacaaagtatcagcagaaaaaaattc 364
Query: 61 atattttagatagcagttgttaaaataaccattaataagcacagaaaagaacatttaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atattttagatagcagttgttaaaataaccattaataagcacagaaaagaacatttaaat 304
Query: 121 tttcagtgaaaatagctacatgggtggctcagaggtaaggaatatagcaagaatgttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tttcagtgaaaatagctacatgggtggctcagaggtaaggaatatagcaagaatgttcaa 244
Query: 181 ggttctagtttccattctcaaccttgcaaaaaagatttttaaa 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggttctagtttccattctcaaccttgcaaaaaagatttttaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
