Query= MSMg01no518_l07.b1 MSMg01no518_l07.b1 CHROMAT_FILE:
MSMg01no518_l07.b1 PHD_FILE: MSMg01no518_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:11 2005
(685 letters)
>mm_chr2_144166981_144168065
Length = 1085
Score = 1307 bits (676), Expect = 0.0
Identities = 679/680 (99%)
Strand = Plus / Plus
Query: 5 gaattcctcatgtttctgtctgcatgctgcacgcacttagacaactatttcccaactctt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcatgttcctgtctgcatgctgcacgcacttagacaactatttcccaactctt 264
Query: 65 ggagggtctctgctgctgcctaattactaaacataaaggtcaactttgaggcaggcactg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggagggtctctgctgctgcctaattactaaacataaaggtcaactttgaggcaggcactg 324
Query: 125 gtatttggtggctctacccttactagaatctcagacttctttctttctactcagtagaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtatttggtggctctacccttactagaatctcagacttctttctttctactcagtagaat 384
Query: 185 aacaagacttggggttttttcccactcacattttgaaattcccagccgaaggactggaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacaagacttggggttttttcccactcacattttgaaattcccagccgaaggactggaga 444
Query: 245 gatggctcagcagttacaagtgagtgtttagcagaagactggagtttggttcctggcacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatggctcagcagttacaagtgagtgtttagcagaagactggagtttggttcctggcacc 504
Query: 305 cacatggtagctcaaaactacctggaactccagtcccaggtcggacatcgtctgctgacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cacatggtagctcaaaactacctggaactccagtcccaggtcggacatcgtctgctgacc 564
Query: 365 tccacgggctcctgcgcactctcaaacatatatactcatgcaggttcacacatatacata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccacgggctcctgcgcactctcaaacatatatactcatgcaggttcacacatatacata 624
Query: 425 ttaaaaaatcagagagtaaaaaagaaatcccaaccaggaagggacatatatcctcaccct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttaaaaaatcagagagtaaaaaagaaatcccaaccaggaagggacatatatcctcaccct 684
Query: 485 ctgttttaaagaattaattactcggcacacaggcactaggtatagggcccttaagatgag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctgttttaaagaattaattactcggcacacaggcactaggtatagggcccttaagatgag 744
Query: 545 aagccaacatcaagagacagcaccacactatatacaggatagataaatggcacaaagttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagccaacatcaagagacagcaccacactatatacaggatagataaatggcacaaagttt 804
Query: 605 ccagggtcaccagtcatctctgacccctgcagggataataagaggtgaggaaacacagct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ccagggtcaccagtcatctctgacccctgcagggataataagaggtgaggaaacacagct 864
Query: 665 gggaagccaagcttggccaa 684
||||||||||||||||||||
Sbjct: 865 gggaagccaagcttggccaa 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_l07.g1 MSMg01no518_l07.g1 CHROMAT_FILE:
MSMg01no518_l07.g1 PHD_FILE: MSMg01no518_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:11 2005
(675 letters)
>mm_chr2_144363260_144364334
Length = 1075
Score = 1220 bits (631), Expect = 0.0
Identities = 664/675 (98%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 1 actacgtagaaaaggcaggcttcaaactcagagatccaactgtctctgcctcccaaatgc 60
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 825 actatgtagaaaaggcaggcttcaaactcagagatccaactgcctctgcctcccaaatgc 766
Query: 61 tgggactaaggtatacacctccctgcctggcttggaggcatattaacacagcatgaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tgggactaaggtatacacctccctgcctggcttggaggcatattaacacagcatgaagac 706
Query: 121 gagcccattctcctgcccttttacctgggtaaaaggctattagcaggtgcttaggaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gagcccattctcctgcccttttacctgggtaaaaggctattagcaggtgcttaggaatga 646
Query: 181 aggaagtgagtactacactgatggacaacaatttaatttttactaagttgaagatattct 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 645 aggaagtgagtactacactgatggacaacaatttaatttctactaagttgaagatattct 586
Query: 241 gtgtttaaggatcttcatagggtgctaagtagaattaccaggatgttggcttctgtctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtgtttaaggatcttcatagggtgctaagtagaattaccaggatgttggcttctgtctag 526
Query: 301 gagttgaaactgggtcacaaagagctcaggggtacagacaaaggctatcataacgaatat 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 525 gagttgaaactgggtcacaaagagctcaggggtacagacaaaggttatcataacgaatat 466
Query: 361 ggcagagtagcagcccacgagtataaatgccacaagataggaagtgccttttgctcccta 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 465 ggcagagtagcagcccacgagtataaatgccataagataggaagtgccttttgctcccta 406
Query: 421 taacttcaggaatgaatgagcaagagtgctaaggaatactgggaaaagcattatgtttat 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tagcttcaggaatgaatgagcaagagtgctaaggaatactgggaaaagcattatgtttat 346
Query: 481 tctaagtgatattttctgcttaatttaactttcttctttttcctggggagcaggggggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tctaagtgatattttctgcttaatttaactttcttctttttcctggggagcaggggggca 286
Query: 541 ctaggggatcgaatctggagaagagagggcctgggtacactaaccacgtgctctgccact 600
||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 285 ctaggggatcggatctggagaagagagggcctgggtacactaagcaagtgctctgccact 226
Query: 601 gagctacacccaccctgaagttccctccctctttaggggaagaaataacatcactaaata 660
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 225 gagctacacccaccctgaagttccctcgctctttaggg-aagaaataacatcactaaata 167
Query: 661 acatccaaagacaca 675
|||||||||||||||
Sbjct: 166 acatccaaagacaca 152
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
