Query= MSMg01no521_e02.b1 MSMg01no521_e02.b1 CHROMAT_FILE:
MSMg01no521_e02.b1 PHD_FILE: MSMg01no521_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:32 2005
(689 letters)
>mm_chr2_44420373_44421461
Length = 1089
Score = 1324 bits (685), Expect = 0.0
Identities = 685/685 (100%)
Strand = Plus / Plus
Query: 5 gaattcaggctccgtgtcatccagtacaaaggataaaaacggattcaaccggaaattcaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggctccgtgtcatccagtacaaaggataaaaacggattcaaccggaaattcaa 264
Query: 65 tgtggcaccacatatgggatacatgagtgcggttatacaacaggccacagattttttttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtggcaccacatatgggatacatgagtgcggttatacaacaggccacagattttttttt 324
Query: 125 gaacagtctcctacatgtgatgccgaggacatgtgtaaccatcataacgtctctaggaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaacagtctcctacatgtgatgccgaggacatgtgtaaccatcataacgtctctaggaat 384
Query: 185 ctgtatttaatttgagttggggtggtggcagggattggagatctgaagccgccacaggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgtatttaatttgagttggggtggtggcagggattggagatctgaagccgccacaggtt 444
Query: 245 tgtggcagatggctctgtgtcagctatgacaagcagccaggctcggcttcctctgcagat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtggcagatggctctgtgtcagctatgacaagcagccaggctcggcttcctctgcagat 504
Query: 305 tttcttttctctctgatcaggtaaatatgggcacactctggaaagttcttcagattctgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttcttttctctctgatcaggtaaatatgggcacactctggaaagttcttcagattctgc 564
Query: 365 cttaggctgcaagtttgcgacttagccccatctgtcacaaatcttccctgggttctgttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttaggctgcaagtttgcgacttagccccatctgtcacaaatcttccctgggttctgttg 624
Query: 425 tgagcagagacctgaatttaccatgtagggctgcccaagaaaatggagccacttcaccct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgagcagagacctgaatttaccatgtagggctgcccaagaaaatggagccacttcaccct 684
Query: 485 gtaacaagggggaggaagagattagaaagcagtgaataagcacaggccccgagacaagag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtaacaagggggaggaagagattagaaagcagtgaataagcacaggccccgagacaagag 744
Query: 545 gatgcggaaactcctgctgcaaacttgcttcatctctccaactcttaccccaaagccatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gatgcggaaactcctgctgcaaacttgcttcatctctccaactcttaccccaaagccatc 804
Query: 605 aagtcccatcaccccaagaacacctggcttccgactgctttagtgtcactgcattttaac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aagtcccatcaccccaagaacacctggcttccgactgctttagtgtcactgcattttaac 864
Query: 665 catgagaggactctgctgcatacat 689
|||||||||||||||||||||||||
Sbjct: 865 catgagaggactctgctgcatacat 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_e02.g1 MSMg01no521_e02.g1 CHROMAT_FILE:
MSMg01no521_e02.g1 PHD_FILE: MSMg01no521_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:32 2005
(651 letters)
>mm_chr2_44570793_44571843
Length = 1051
Score = 625 bits (323), Expect = 0.0
Identities = 333/337 (98%), Gaps = 2/337 (0%)
Strand = Plus / Minus
Query: 317 ggactctggcaggattaatgtagtaaaatggccattgtgccaaaagcaatctacagattc 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 ggactctggcaggattaatgtagtaaaatggccattgtgccaaaagcaatctacagattc 992
Query: 377 agtgcaatcctcatcaaaattccaactcaattcttc--agagttagaaagggcaatttcc 434
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 991 agtgcaatcctcatcaaaattccaactcaattcttcatagagttagaaagggcaatttcc 932
Query: 435 aaatacatctggaataacaaaaaacccaggattgcataaactattctcaacaataaaaga 494
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 931 aaatacatctggaataacaaaaaacccaagattgcataaactattctcaacaataaaaga 872
Query: 495 acttttggggaaatcaccattattgttgttttaaaatacacaacaatattgtgttaaacc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 acttttggggaaatcaccattattgttgttttaaaatacacaacaatattgtgttaaacc 812
Query: 555 ttttaacaatacatagtaaacattcaatatacatattttaatatttatttggttggttag 614
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ttttaacagtacatagtaaacattcaatatacatattttaatatttatttggttggttag 752
Query: 615 tttttgactttttgcaacagtctatgtagccttagat 651
|||||||||||||||||||||||||||||||||||||
Sbjct: 751 tttttgactttttgcaacagtctatgtagccttagat 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
