Query= MSMg01no521_e05.b1 MSMg01no521_e05.b1 CHROMAT_FILE:
MSMg01no521_e05.b1 PHD_FILE: MSMg01no521_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:32 2005
(596 letters)
>mm_chr2_158789150_158790145
Length = 996
Score = 1067 bits (552), Expect = 0.0
Identities = 581/592 (98%), Gaps = 3/592 (0%)
Strand = Plus / Plus
Query: 5 gaattcctacagatttccaagactcttggaactctagcttcacatgcacaccattctcac 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctacagagttccaagactcttggaactctagcttcacatgcacaccattctcac 264
Query: 65 caaggtctccatgggacccacactcagatgagcaaggcagctctgagctgtatgagggtg 124
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 caaggtctccatgggacccacactcagatgagcaaggcagctctaagctgtatgagggtg 324
Query: 125 aagggtataaatatcacctctgctaccacaagccagtccactatgaccatctccacctct 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 aagggtataaatatcacctctgctaccacaagccagtccaccatgaccatctccacctct 384
Query: 185 gctctgcaaccacccctacctcacctctaccactgcctaacctctgcttttattaccacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctctgcaaccacccctacctcacctctaccactgcctaacctctgcttttattaccacc 444
Query: 245 tccctctcaacttcctctctacccccgcatcctgcttaatcttcacttccaccacctcct 304
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 tccctctcaacttcctctctacccccgcatcctgcttaatcctcacttccaccacctcct 504
Query: 305 cctcccctatgaccttatccccttctaaactgcagttcacagtgatttagttccctgtat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctcccctatgaccttatccccttctaaactgcagttcacagtgatttagttccctgtat 564
Query: 365 aatcgccaatgtctacaacaatgcctgatgtacatattttgcaattatatacaattgctg 424
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 aatcgccaatgtctacaacaatgcctgatgtacatattttgtaattatatacaattgctg 624
Query: 425 tcatccctttaaacagtggcagcgaacgcttaaaatatgcttgtgtgtatcatctcagtt 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 tcatccctttaaacagtggcagcgaatgcttaaaatatgcttgtgtgtatcatctcagtt 684
Query: 485 tctttctacagaagtttatgattttagaggaggggctgagaaatcctgtggactacttgt 544
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 685 tcttcctacagaagtttatgattttacaggaggggctgagaaatcctgtggactacttgt 744
Query: 545 gaagtctgtgagctaactgttttctcacccatccccccccccccactttctg 596
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 745 gaagtctgtgagctaactgttttctcacccatccccccccccc---tttctg 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_e05.g1 MSMg01no521_e05.g1 CHROMAT_FILE:
MSMg01no521_e05.g1 PHD_FILE: MSMg01no521_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:32 2005
(664 letters)
>mm_chr2_158935777_158936840
Length = 1064
Score = 638 bits (330), Expect = 0.0
Identities = 342/346 (98%)
Strand = Plus / Minus
Query: 1 cccagccatgtccaatatgcaggctgtggaccacggacctccctgatagttgtgaatgaa 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cccagccatgttcaatatgcaggctgtggaccacggacctccctgatagttgtgaatgaa 287
Query: 61 gccaaacacatttgtagatggcaccatcaggccttttgtggttggatatctagaacccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gccaaacacatttgtagatggcaccatcaggccttttgtggttggatatctagaacccat 227
Query: 121 gatgtatatttactaattaattgattaaaacaatccaaacctgaatttggtcaaactcta 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 226 gatgtatatttactaattaattgattaaaacaattcaaacctgaatttggtcaaactcta 167
Query: 181 aatctagctactaacttattttcttagaattgctaggtgtgaagggcacttaaacccagg 240
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 166 aatctagctactaacttattttctgagaattactaggtgtgaagggcacttaaacccagg 107
Query: 241 aggttgccatcaaggtgcagacaggactaagcatagcagttgatatctttaatccaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 aggttgccatcaaggtgcagacaggactaagcatagcagttgatatctttaatccaaatt 47
Query: 301 ctctagaaactgaagcaggagtgagttccaggcttccctggactac 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 ctctagaaactgaagcaggagtgagttccaggcttccctggactac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
