Query= MSMg01no521_g15.b1 MSMg01no521_g15.b1 CHROMAT_FILE:
MSMg01no521_g15.b1 PHD_FILE: MSMg01no521_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:44 2005
(701 letters)
>mm_chr2_35981899_35982999
Length = 1101
Score = 1228 bits (635), Expect = 0.0
Identities = 693/726 (95%), Gaps = 25/726 (3%)
Strand = Plus / Plus
Query: 1 tcctcactctgtgaggga-tacatagtgaggttgtctcanaggggaaaaaaagggagtag 59
|||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 176 tcctcactctgtgagggattacatagtgagattgtctcaaaggggaaaaaaagggagtag 235
Query: 60 acatactggccttgggtttaatccaaacacac----aaaatctgtatgcatcttttgaga 115
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 236 acatactggccttgggtttaatccaaacacacaaataaaatctgtatgcatcttttgaga 295
Query: 116 ctgagaagcatactca------ctctctctcactctctctctctctct----------ca 159
|||||||||||||||| ||||||||| |||||||||||||||| ||
Sbjct: 296 ctgagaagcatactcactctctctctctctccctctctctctctctctctctcacacaca 355
Query: 160 catacacacacat----acacacacacacacaatttgtgcaggtgtgtatcaattatgta 215
|| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 356 cacacacacacatacacacacacacacacacaatttgtgcaggtgtatatcaattatgta 415
Query: 216 tgcacaagagtagtgtgtgtaggcccgtgcacgtgcagtggtaaggccaatgttgaatgc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgcacaagagtagtgtgtgtaggcccgtgcacgtgcagtggtaaggccaatgttgaatgc 475
Query: 276 atttctccactgcttatcaccttgtttttttgtggcagagtctcaccgaatctgtaactc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atttctccactgcttatcaccttgtttttttgtggcagagtctcaccgaatctgtaactc 535
Query: 336 aagagcctgaactctgttgaaaccagggagaggatgtttgtgcaagctgtattacttaaa 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aagagcctgaactctgttgaaaccagggagaggatgtttgtgcaagctgtattacttaaa 595
Query: 396 ttcactggtggaaggacgtagcctttagctctgtgtgaggcgcacagagaataaccagac 455
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 596 ttcactggtggaaggacgtagcctttagctctgtgtgaggtgcacagagaataaccagac 655
Query: 456 gtgactcttgcccgtgcggtctggtggtcaagagatgtagaatggattatgacagagtgc 515
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atgactcttgcccgtgcggtctggtggtcaagagatgtagaatggattatgacagagtgc 715
Query: 516 agactataagaggtagagggagctcaattacctgcttagtttcaaagttaacaaaacagt 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 agactataagaggtagagggagctcaattacctgcttagtttcaaagttaacaaaacagt 775
Query: 576 accctcggggctggccctccaaagcacccgacttatggaagaggaagtcaaactgcttca 635
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 776 accctcggggctggccctccaaagcacctgacttatggaagaggaagtcaaactgcttca 835
Query: 636 ccttgccaaacttctggaggagcttgaggaggtggtatctgtggagacagaagagccatg 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ccttgccaaacttctggaggagcttgaggaggtggtatctgtggagacagaagagccatg 895
Query: 696 agttca 701
||||||
Sbjct: 896 agttca 901
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1101
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1091
Effective search space: 753881
Effective search space used: 753881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_g15.g1 MSMg01no521_g15.g1 CHROMAT_FILE:
MSMg01no521_g15.g1 PHD_FILE: MSMg01no521_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:45 2005
(193 letters)
>mm_chr2_36131560_36132152
Length = 593
Score = 364 bits (188), Expect = e-105
Identities = 191/192 (99%)
Strand = Plus / Minus
Query: 1 tggctctctacagtgctctgggtttgaattcattaaggatcatcattggattagccccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tggctctctacagtgctctgggtttgaattcattaaggatcatcattggattagccccat 333
Query: 61 ggagttagcatataacatgagttagcatataatatatttatcccttagagcatgaaggac 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 332 ggagttagcatataacatgagttagcatataatatacttatcccttagagcatgaaggac 273
Query: 121 agccatgaccctagattatgtggagcctagaattttgttaagcaactgctagttatggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agccatgaccctagattatgtggagcctagaattttgttaagcaactgctagttatggaa 213
Query: 181 aatgcatgggta 192
||||||||||||
Sbjct: 212 aatgcatgggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
