Query= MSMg01no521_j08.b1 MSMg01no521_j08.b1 CHROMAT_FILE:
MSMg01no521_j08.b1 PHD_FILE: MSMg01no521_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:57 2005
(625 letters)
>mm_chr2_11455005_11456029
Length = 1025
Score = 1154 bits (597), Expect = 0.0
Identities = 615/621 (99%), Gaps = 4/621 (0%)
Strand = Plus / Plus
Query: 6 ggaa-tcatagtttgtagcctagactgcccttgactcgtggcaatcctcctgtttctgac 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcatagtttgtagcctagactgcccttgactcgtggcaatcctcctgtttctgac 264
Query: 65 tcttgaaataagggatattagtacctaccctgtaggatagtaggggcaggggcaggcctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcttgaaataagggatattagtacctaccctgtaggatagtaggggcaggggcaggcctg 324
Query: 125 tttgtgtatttgtgtgtgtacatcttttaaaggcaagatctcacgtagcccagcctggtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgtgtatttgtgtgtgtacatcttttaaaggcaagatctcacgtagcccagcctggtc 384
Query: 185 tctaacttgctatgaagctaagactggccttgagttcctgatctcttgactacctgctag 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 tctaacttgctatgaagctaagactggccttgaattcctgatctcttgactacctgctag 444
Query: 245 gattatacatatatacgatcatacccagatatccccagggtaataccaaaccaaaaccca 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 gattatacatatatacgatcatacccagatatccctagggtaataccaaaccaaaaccca 504
Query: 305 gggaccacagagctgatgcagaccagcatctctctcctgacttttcagggaagtagactc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gggaccacagagctgatgcagaccagcatctctctcctgacttttcagggaagtagactc 564
Query: 365 tgtgttatcttctaggtaataagtactcaggtcaaattcatccttaagacacagctctga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgtgttatcttctaggtaataagtactcaggtcaaattcatccttaagacacagctctga 624
Query: 425 gccgggcagtggtggcgcacgcctttaatcccagcactcgggaggcggaggcaggcagat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gccgggcagtggtggcgcacgcctttaatcccagcactcgggaggcggaggcaggcagat 684
Query: 485 ttctgagttcgaggccagcttggtctacaaagtgagttccaggacagccagggctataca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttctgagttcgaggccagcttggtctacaaagtgagttccaggacagccagggctataca 744
Query: 545 gagaaaccctgtcttgaaaaaccaaaaaaaataaaaataaaaataaaaaaataatataaa 604
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||
Sbjct: 745 gagaaaccctgtcttgaaaaaccaaaaaaa-taaaaataaaaataaaaaaataa-a-aaa 801
Query: 605 aaataagacacagctctgcag 625
|||||||||||||||||||||
Sbjct: 802 aaataagacacagctctgcag 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_j08.g1 MSMg01no521_j08.g1 CHROMAT_FILE:
MSMg01no521_j08.g1 PHD_FILE: MSMg01no521_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:58 2005
(263 letters)
>mm_chr2_11598127_11598789
Length = 663
Score = 509 bits (263), Expect = e-149
Identities = 263/263 (100%)
Strand = Plus / Minus
Query: 1 gttgctgagatgcacgtcttacctgtaaggttctcttggtgcatagactgtgttggcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gttgctgagatgcacgtcttacctgtaaggttctcttggtgcatagactgtgttggcttc 404
Query: 61 tgcatgtctgttgtggtttgttgctctttctggtgttcaagttgagctgtaacttgcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgcatgtctgttgtggtttgttgctctttctggtgttcaagttgagctgtaacttgcttt 344
Query: 121 ctcgatttgtcatgggctggagaatatgggagaaatgaggcaagtaagttcccaaatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctcgatttgtcatgggctggagaatatgggagaaatgaggcaagtaagttcccaaatgtt 284
Query: 181 cagaatagaaagagctgtctatgcggtcatttaccctgggacacctctctggtgcccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cagaatagaaagagctgtctatgcggtcatttaccctgggacacctctctggtgcccaga 224
Query: 241 gacatatctgtgctgggtgtgca 263
|||||||||||||||||||||||
Sbjct: 223 gacatatctgtgctgggtgtgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
