Query= MSMg01no521_k06.b1 MSMg01no521_k06.b1 CHROMAT_FILE:
MSMg01no521_k06.b1 PHD_FILE: MSMg01no521_k06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:02 2005
(413 letters)
>mm_chr2_151900588_151901404
Length = 817
Score = 748 bits (387), Expect = 0.0
Identities = 408/417 (97%), Gaps = 4/417 (0%)
Strand = Plus / Plus
Query: 1 caagcttttaatcccagcactttggaggcagaagcaggcagatgtctgtgagttggagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagcttttaatcccagcactttggaggcagaagcaggcagatgtctgtgagttggagac 260
Query: 61 cagcctcatttacagagagagagaatcccaggacagccagggttacagagaaaaaccctg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcctcaattacagagagagagaatcccaggacagccagggttacagagaaaaaccctg 320
Query: 121 tcttggaaaagaaaacagccataaaaatggtttgcaatgccccaggcccttgtgttgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tcttggaaaagaaaacagccataaaaatggtttgcaatgccccaggcccttgttttgagc 380
Query: 181 ctctgatccgcctc----gcttgcatgtgaagctctcctaccggagtttgagccacacac 236
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgatccgcctcacttgcttgcatgtgaagctctcctaccggagtttgagccacacac 440
Query: 237 attcagaccagctggtggggagccctgtcccaagtcccctggccctgcagagcctggcga 296
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 attcagaccagctggtggggagccctgtcccaagtcccctggccctgcagagtctggcga 500
Query: 297 tcagcctcccaccagccagtctcttccaaaagacctcagcttggtgctgaaatgtgagca 356
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 tcagcctcccaccagccagtctcttccaaaagacctcagcaaggtgctgaaatgtgagca 560
Query: 357 tttcagggacagaaatatctccaactttgaaggaaagacacttggcagggtgtcgga 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcagggacagaaatatctccaactttgaaggaaagacacttggcagggtgtcgga 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 817
Length adjustment: 9
Effective length of query: 404
Effective length of database: 808
Effective search space: 326432
Effective search space used: 326432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_k06.g1 MSMg01no521_k06.g1 CHROMAT_FILE:
MSMg01no521_k06.g1 PHD_FILE: MSMg01no521_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:02 2005
(475 letters)
>mm_chr2_152106290_152107168
Length = 879
Score = 891 bits (461), Expect = 0.0
Identities = 470/475 (98%), Gaps = 4/475 (0%)
Strand = Plus / Minus
Query: 1 atcagtctaagtgtcttgttcaaatcacgatccagtgcaaacataatcacaaactgcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atcagtctaagtgtcttgttcaaatcacgatccagtgcaaacataatcacaaactgcatc 616
Query: 61 tctggcacacctggtgctttcagctctgcacaaatccaacatggtgaccctcatagcacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tctggcacacctggtgctttcagctctgcacaaatccaacatggtgaccctcatagcacg 556
Query: 121 ctagggcacacaagaatcgagtacaataaatagtcactgcaagtggccaaaaagaagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ctagggcacacaagaatcgagtacaataaatagtcactgcaagtggccaaaaagaagaaa 496
Query: 181 ctcactctgcagtccttttag----ctctatggttgagaaatgttaagaaaagcattagc 236
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 495 ctcactctgcagtccttttagctctctctatggttgagaaatgttaagaaaagcattagc 436
Query: 237 atcctctacttttatcattacattcgctaaagccaccaccttgataaagttactaaagcc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atcctctacttttatcattacattcgctaaagccaccaccttgataaagttactaaagcc 376
Query: 297 aagatgggttacaaagttaggtaagttaattaaattcaactccccaaacaattatgtttt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagatgggttacaaagttaggtaagttaattaaattcaactccccaaacaattatgtttt 316
Query: 357 atctatgatgccaggtgagaaatgcttatgaatctaaaaaggcaggagaatggggaacta 416
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 315 atctatgatgccaggtgagaaatgcttatgaatctaaaaaggtaggagaatggggaacta 256
Query: 417 agattttaggccttaaaatatgttggaagatttgttttcctagtccccacaggca 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agattttaggccttaaaatatgttggaagatttgttttcctagtccccacaggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 879
Length adjustment: 10
Effective length of query: 465
Effective length of database: 869
Effective search space: 404085
Effective search space used: 404085
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
