NNAACCATTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATTATAAAAGCAATTTTAAAAGTCCATTTATTTTTTATGTAT
ACGTGTGCATGCATATGGATATGTGTAAAGGTGCATCTATGCATGGTGCA
CATATGAAGTTCTGAGGACAACTTTTGGGAATCAGTTCTATCTCTTTTTA
CCATATTGATCTCAGGAATTGAACTTGGGTTGTCAGGTTTGGCAACAAGC
ACCTTTATCTACTGAACCATGTCACTGTCCCCGGTCAATCTTTTCAGCCC
TTGTTAGTCCAAGATCTAATTTCATCTTAAGAATATGTAGATTTATTTAT
TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGCAGA
CAGAACTTTATATTTGCAGCAGTAGGAACAATGCGCCTTATTGTGTGAAA
TGATAGTCCATGTTTAACTAGGAGATATACACGAAGGATAATTGTGATGA
GCTGTAAATCAGTTGGTAGAGTGTTGACCTAGCATGCAGGAATCTCTGGG
TTCCATCTCCAATGCTACAAAAAACTTTGACATCATGTTGCACATGTGTA
ATCCTGGAACTGTATAAATGGAGAGAAGAAGATCAGAAGTTTAAGGTCAT
CTTGGACTACAGAAAAGAGATATATAATATCCTCCCTGTTGATCAATACC
TAAACAGATGAGGCCTATTTAATAAAGAGTTTTATTAATGTTCCATGTGG
AAACTAATTTTCAAAGACTAATACTTTTTTAATTAT

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGCACTGTACCCTGT
TATTTAATTGGGTTATTTGGTTGTCTGGAGTCTAAGTTCTTTGTATATTT
TGGATAATTGCCCTCTATCAGATGTAGAATTGGTAAAGATCTTTTCCCAA
TCGGTAGGTTGACATTTTGTCCTATTGACGGTGTCCTTTGCCTTACAGAA
GCTGTTCAGTTTCATAATGTCCCATTTGTCAATTGTTTATTGCAGAAGCT
GAACCATTGGTGTTCTGTTCAGGAAAATTTCCCCTGTATCAATGTGTACA
AGGCTCTTTACCACTTTCTCTTCTATTAGATTCAGCATATCTGGTTTTAT
GTGTAGGTCCCTGATATACTTGGACTTGAGCTTTGTACAAAGAGATAAAA
ATGGATCAATTTGCATTCTTCTACATGTTGCCAGGTAAACCATCACCATT
TGTTGAAATTGCTGCCTTTTTTCCCATTGGATGGTAAAAACAAAACAAAA
CAAAACAAAACAAAACATCAATTCTTCTTTGTCAAATATCAAATGACCAT
ACATGTGTGGGTTTATTTTGGGGCCTTCAATTCTATTCCATTGATCTACC
TGTCTGCCGTTGTAACAATACCATGTGGTTTTTATTACCATTGCTCTATA
GTATAGCTTGAGGTCAGGGATGGTGATTCCCCCAGAATATTTTATTGGTG
AGATTTGTTTCACTATCTTGGGTTTTTGT

Query= MSMg01no521_k21.b1 MSMg01no521_k21.b1 CHROMAT_FILE:
MSMg01no521_k21.b1 PHD_FILE: MSMg01no521_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:05 2005
         (512 letters)



>mm_chr2_114756694_114757605
          Length = 912

 Score =  884 bits (457), Expect = 0.0
 Identities = 485/507 (95%), Gaps = 20/507 (3%)
 Strand = Plus / Plus

                                                                       
Query: 6   aattcattataaaagcaattttaaaagtccatttattttttatgtatacgtgtgcatgca 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 aattcattataaaagcaattttaaaagtccatttattttttatgtatacgtgtgcatgca 285

                                                                       
Query: 66  tatggatatgtgtaaaggtgcatctatgcatggtgcacatatgaagttctgaggacaact 125
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tatggatatgtataaaggtgcatctatgcatggtgcacatatgaagttctgaggacaact 345

                                                                       
Query: 126 tttgggaatcagttctatctctttttaccatattgatctcaggaattgaacttgggttgt 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tttgggaatcagttctatctctttttaccatattgatctcaggaattgaacttgggttgt 405

                                                                       
Query: 186 caggtttggcaacaagcacctttatctactgaaccatgtcactgtccccggtcaatcttt 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 caggtttggcaacaagcacctttatctactgaaccatgtcactgtccccggtcaatcttt 465

                                                                       
Query: 246 tcagcccttgttagtccaagatctaatttcatcttaagaatatgtagatttatttattta 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcagcccttgttagtccaagatctaatttcatcttaagaatatgtagatttatttattta 525

                                                                       
Query: 306 tttatttatttatttatttatttatttatttatttatttattgcagacagaactttatat 365
           |||||||||||||||||||||||                    |||||||||||||||||
Sbjct: 526 tttatttatttatttatttattt--------------------cagacagaactttatat 565

                                                                       
Query: 366 ttgcagcagtaggaacaatgcgccttattgtgtgaaatgatagtccatgtttaactagga 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttgcagcagtaggaacaatgcgccttattgtgtgaaatgatagtccatgtttaactagga 625

                                                                       
Query: 426 gatatacacgaaggataattgtgatgagctgtaaatcagttggtagagtgttgacctagc 485
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 626 gatatacacgaaggataattgtgatgggctgtaaatcagttggtagagtgttgacctagc 685

                                      
Query: 486 atgcaggaatctctgggttccatctcc 512
           |||||||||||||||||||||||||||
Sbjct: 686 atgcaggaatctctgggttccatctcc 712


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space:   452804
Effective search space used:   452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)